Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J18
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.81 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   1.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.3  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 664 ECKQSIFRRRAGHSRGSCRPTRRSTVGFLLKHTD 563
           +C  S  R+     +G+C+  R   VG+ LK  D
Sbjct: 61  QCSNSPLRKARYTEKGTCKMGREIEVGYDLKSPD 94


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -1

Query: 229 PVPLKQLLQNSLFAPEPICRRSATFLIYLYVPKYTRQNNLLQLPAQVCLGVFSMLL 62
           P+PL  +   ++  P  IC  SA  LI++ V ++ R      +PA  CL +   LL
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV-QWVR-----SIPAFTCLPLSDQLL 230


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 204 CNSCFSGTGSPNKTGNFIH 260
           C+ C+S  G+ +K G  IH
Sbjct: 298 CDVCYSTIGTVSKAGELIH 316


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 229 PVPLKQLLQNSLFAPEPICRRSATFLIYLYVPKYTRQNNLLQLPAQVCLGVFSMLL 62
           P+PL  +   ++  P  IC  SA  L+++ V ++ R      +PA  CL +   LL
Sbjct: 182 PLPLPPIFAPTMINPSAICE-SAAQLLFMNV-QWVR-----SIPAFTCLPLSDQLL 230


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 333 IGRVFSFEGLPIRRLH 286
           + +  SFE LP RRLH
Sbjct: 47  VSKPVSFESLPNRRLH 62


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 204 CNSCFSGTGSPNKTGNFIH 260
           C+ C+S     NK G  IH
Sbjct: 577 CDVCYSTIEEANKAGELIH 595


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 204 CNSCFSGTGSPNKTGNFIH 260
           C+ C+S     NK G  IH
Sbjct: 302 CDVCYSTIEEANKAGELIH 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,067
Number of Sequences: 336
Number of extensions: 4680
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)