Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J18
(904 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 177 1e-45
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 158 1e-39
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 108 1e-24
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 104 2e-23
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 90 3e-19
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 49 1e-06
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 27 3.6
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 6.4
SPBC725.14 |arg6||acetylglutamate synthase Arg6 |Schizosaccharom... 26 6.4
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 177 bits (432), Expect = 1e-45
Identities = 85/182 (46%), Positives = 113/182 (62%)
Frame = +1
Query: 262 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 441
GLFINN+ V S G K +P+ ++I EV F+ +PWR
Sbjct: 24 GLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFS 83
Query: 442 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 621
+++RG +++LAD IE++ YLAS+ETLDNGK + GD+ A+ RYY GWADK +
Sbjct: 84 SAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLAR-GDVQAAADCFRYYGGWADKDY 142
Query: 622 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMXPAXXTPLT 801
G + D K FAYTRHEP+GVCGQIIPWNFP LM AWK+ PA+A G T+++ A TPL+
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLS 202
Query: 802 XL 807
L
Sbjct: 203 AL 204
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 158 bits (383), Expect = 1e-39
Identities = 79/194 (40%), Positives = 115/194 (59%)
Frame = +1
Query: 262 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 441
GL+IN EW KS++ T++T +P+ +VIA+V FK W+ +
Sbjct: 22 GLYINGEWHKSAE--TWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT---WKKVP 76
Query: 442 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 621
SE+G L+ KLA+L E+ LA++E +D+GKP + GD+ +I LRY AGWADKI+
Sbjct: 77 GSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIY 136
Query: 622 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMXPAXXTPLT 801
G V+P + AY + P+GVCGQI+PWN+P+ MA WK+ PALA G +++ A TPL+
Sbjct: 137 GQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLS 196
Query: 802 XLXHRSTXXGXRFP 843
L + FP
Sbjct: 197 LLYFATLVEEAGFP 210
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 108 bits (259), Expect = 1e-24
Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Frame = +1
Query: 268 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 447
+I +WV ++ GKTF ENP + +A V F +R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFL---SYRNSDIK 83
Query: 448 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 627
ER A++ + DLI + LA++ TL+NGK D+ G++ + K + ++AG A +I G+
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAK-GEVVYAAKFIDWFAGEALRISGD 142
Query: 628 V-LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMXPAXXTPLTX 804
+ ++ + T +PVGV G I PWNFP M K+G ALA GCTVV+ PA TP T
Sbjct: 143 SSMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTA 202
Query: 805 L 807
L
Sbjct: 203 L 203
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 104 bits (250), Expect = 2e-23
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Frame = +1
Query: 268 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 447
F+ +W+ S + KTF+ +NPA G++I +V FK ++
Sbjct: 21 FVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKT---YKNFTHV 77
Query: 448 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 627
+R L+ + A+LI ++ L + TL+NGKP + ++ L++YA A + G+
Sbjct: 78 QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEM-EVTTCSGYLKWYAAEAVRTFGD 136
Query: 628 VLPAD--GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMXPAXXTPLT 801
V P+ + F + +PVGV I PWNFP M A K G ALA GCT + PA TP
Sbjct: 137 VAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYV 196
Query: 802 XL 807
L
Sbjct: 197 CL 198
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 90.2 bits (214), Expect = 3e-19
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 5/186 (2%)
Frame = +1
Query: 265 LFINNEWVKSSD--GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTM 438
LFI+ ++V + K NPA ++I + F+ G W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTFRSGI-WAKW 81
Query: 439 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI 618
+RG ++ K+A ++ R LA ++T++ GKP + F D+ + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALF-DIDSCADMFEYYAEVAETD 140
Query: 619 HGNV---LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMXPAXX 789
+ V LP + + A+ + P GV G I PWNFP+ MA WKL PA+A+G VV+ P+
Sbjct: 141 NPTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSEL 200
Query: 790 TPLTXL 807
P + L
Sbjct: 201 APWSCL 206
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +1
Query: 427 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRY-YAG 603
W++ +ER + L + I R++ A + D GK D+ FG++ +++ + + A
Sbjct: 41 WKSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLAN 100
Query: 604 WADKIHGNVLPAD---GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVM 774
+ P Y ++EP+GV ++ WN+P+ A + AL G +V+
Sbjct: 101 GEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVV 160
Query: 775 XPAXXT 792
+ T
Sbjct: 161 KGSELT 166
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 600 RVGRQDPRECPA-RRRKILCLHSS*ASGCVRSDNTMELPYIDGG 728
+ R+ C A RR+K+ C H S C++ YID G
Sbjct: 14 QTSRRAIHSCLACRRKKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 159 VAERLQIGSGAKSEFCNSCFSGTGSPNKT-GNFIHWSLHKQ*VGEV 293
+A + + + CN+ G NK GN IH+ L K G+V
Sbjct: 1054 LAHEINAADSSSEQICNALRRGFLRLNKKLGNVIHYDLRKSSEGDV 1099
>SPBC725.14 |arg6||acetylglutamate synthase Arg6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 604 TRRSTVGFLLKHTDHRNTSP 545
+RRST GFL KH+ ++ SP
Sbjct: 19 SRRSTKGFLQKHSSLKDGSP 38
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,602,859
Number of Sequences: 5004
Number of extensions: 73637
Number of successful extensions: 182
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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