Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J17
(898 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 200 5e-50
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 186 5e-46
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 169 6e-41
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 153 6e-36
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 137 3e-31
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 116 1e-24
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 112 1e-23
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 111 2e-23
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 95 2e-18
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 95 2e-18
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 87 8e-16
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 85 3e-15
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 84 4e-15
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 81 4e-14
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 79 2e-13
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 77 6e-13
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 76 1e-12
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 74 6e-12
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 72 2e-11
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 71 3e-11
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 71 5e-11
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 67 5e-10
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 66 9e-10
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 64 5e-09
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 61 4e-08
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 57 5e-07
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 57 7e-07
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 54 4e-06
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 54 7e-06
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 48 2e-04
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 45 0.003
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 44 0.004
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 42 0.021
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 42 0.028
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 42 0.028
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 41 0.037
UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.037
UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2; ... 41 0.049
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.11
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.11
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 39 0.15
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 38 0.26
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 38 0.46
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.46
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 36 1.4
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 1.4
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 36 1.4
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 1.4
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 35 2.4
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.4
UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4; Thermo... 35 3.2
UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11; Bac... 34 4.3
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 34 4.3
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 34 4.3
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 5.7
UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 7.5
UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1; Hy... 33 7.5
UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3; Lactob... 33 9.9
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 200 bits (487), Expect = 5e-50
Identities = 94/110 (85%), Positives = 100/110 (90%)
Frame = +1
Query: 100 MVAAKKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 279
MVAAKK KK +ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 280 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 186 bits (454), Expect = 5e-46
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1
Query: 112 KKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 291
K+++K +ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 292 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 426
+LAKTGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMP 106
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 169 bits (412), Expect = 6e-41
Identities = 77/109 (70%), Positives = 90/109 (82%)
Frame = +1
Query: 100 MVAAKKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 279
MV KK KK E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 280 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 426
EYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII ++P
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 153 bits (371), Expect = 6e-36
Identities = 65/101 (64%), Positives = 87/101 (86%)
Frame = +1
Query: 109 AKKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 288
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+RK+EIEYY
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYY 61
Query: 289 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 411
L+KT +HHYSGNN++LGTACG+++R C L+ITD GDSDI
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 137 bits (332), Expect = 3e-31
Identities = 65/100 (65%), Positives = 82/100 (82%)
Frame = +1
Query: 124 KXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAK 303
K ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P LRKSE+EYYA+L+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 304 TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 423
T V+++ G N ELGTA GK +RV ++I + GDSDI+TTL
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 116 bits (278), Expect = 1e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1
Query: 262 LRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
LRKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 71 LRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 126
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 112 bits (270), Expect = 1e-23
Identities = 53/106 (50%), Positives = 74/106 (69%)
Frame = +1
Query: 112 KKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 291
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P +S IEYYA
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYYA 63
Query: 292 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
+L+ + + G+N++LGTACGKY+R ++I D G+S+I+ + +
Sbjct: 64 MLSGCDILPFDGDNVDLGTACGKYFRSSVISIIDAGESEILKMIKQ 109
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 111 bits (268), Expect = 2e-23
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = +1
Query: 115 KQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYAL 294
K K E ++S+L +++K+GK+ GYK TLK LR GK K++II N PLRK E+EYYA+
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAM 64
Query: 295 LAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 402
L K VHH+ GNN++LG +CGK Y L IT+ G+
Sbjct: 65 LNKCHVHHFYGNNVDLGLSCGKSYGCSCLGITESGE 100
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 95.5 bits (227), Expect = 2e-18
Identities = 45/101 (44%), Positives = 68/101 (67%)
Frame = +1
Query: 121 KKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 300
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL KS+++Y L+
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLS 67
Query: 301 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 423
KT V ++G++ ELG A G+ + V + I + GD+D+ + L
Sbjct: 68 KTPVRVFAGSSRELGIAVGRQFNVSIMTILEAGDADLTSIL 108
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 95.1 bits (226), Expect = 2e-18
Identities = 47/94 (50%), Positives = 63/94 (67%)
Frame = +1
Query: 133 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV 312
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +RK++IEYYA+LA+ +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITI 67
Query: 313 HHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
Y GNN++LGT G + I G SD I
Sbjct: 68 VLYQGNNVDLGT--GVIWEAQLFLIEFMGMSDFI 99
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 86.6 bits (205), Expect = 8e-16
Identities = 40/101 (39%), Positives = 65/101 (64%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 309
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P + +IEYYA LA
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVP 60
Query: 310 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 432
V Y G +++LG CG+ + V ++A+ D G+SD+I T+ +A
Sbjct: 61 VFVYPGTSMDLGDVCGRPHVVASMAVLDDGESDLIATVRKA 101
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 84.6 bits (200), Expect = 3e-15
Identities = 39/92 (42%), Positives = 61/92 (66%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
I+ + + + +G LG K+T+++L+ GK KLV++A N P K +IEYYA L++ V+
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYT 62
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ G ++ELG+ CGK + V L I DPGDS I+
Sbjct: 63 HEGTSVELGSVCGKPFTVGALLIQDPGDSTIL 94
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 84.2 bits (199), Expect = 4e-15
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +1
Query: 151 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 330
L M++GK LG +T++ + G AKL+I+AKNAP K +I YYA L+ V+ + G
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGT 66
Query: 331 NIELGTACGKYYRVCTLAITDPGDSDII 414
++ELGT GK + V +LAI DPG+S I+
Sbjct: 67 SVELGTLLGKPFVVASLAIVDPGESKIL 94
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 81.0 bits (191), Expect = 4e-14
Identities = 37/99 (37%), Positives = 61/99 (61%)
Frame = +1
Query: 136 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 315
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP + ++EYYA LA +
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPII 61
Query: 316 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 432
Y G +++G G+ + V LA+ D G S I+ EA
Sbjct: 62 VYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRILEQAEEA 100
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
I L + + +G +G+++T + L G KLVIIA NAP K +IEYYA LA +
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAPKWAKDDIEYYAKLAGIPIFV 66
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ G++IELG A + +++ LA+ DPG S+I+
Sbjct: 67 FPGSSIELGAAAKRPHKIMALAVIDPGQSEIL 98
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 77.0 bits (181), Expect = 6e-13
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
I+ L + + +GK +G+++T K L G KL+I+A NAP + +IEYYA LA +
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFV 63
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ G++IELG A + +++ LA+ D G S+I+
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVIDAGQSEIL 95
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = +1
Query: 142 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 321
N+ L +K+G LG T K +++GKA++V+IA N P +S++ Y L +H +
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCPENFRSQLGSYENLF---IHTF 60
Query: 322 SGNNIELGTACGKYYRVCTLAITDPGDSDIIT 417
G+++ LG ACGK + V TLAI PG+SDI++
Sbjct: 61 EGSSVALGKACGKPFMVSTLAIVSPGESDILS 92
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/98 (35%), Positives = 56/98 (57%)
Frame = +1
Query: 136 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 315
S L ++K+GK G K+ +K ++ K K+VI+A K +I +YA L+ V+
Sbjct: 10 SFEGELKSLLKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAKLSNIPVY 69
Query: 316 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
Y G+ +LGT CGK + + T++I D GDS I+ + E
Sbjct: 70 EYKGSGWDLGTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/92 (34%), Positives = 56/92 (60%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
+N + + +GK LG K+T+K ++ G+ KLV++A N P + +++YYA L+ V+
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ ++ELG CGK + V L + D G S+I+
Sbjct: 69 HKITSLELGAVCGKPFPVAALLVLDEGLSNIM 100
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 71.3 bits (167), Expect = 3e-11
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +1
Query: 142 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV--H 315
N+ L +K+GK LG +T ++ +G AKLV++A N P +E Y L K GV +
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP----AEFSGY-LSGKDGVKTY 58
Query: 316 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 417
Y G+ ++LG ACGK + V LAI + GDSDI+T
Sbjct: 59 TYEGSGVQLGRACGKPFIVSALAIEESGDSDILT 92
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/95 (33%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +1
Query: 133 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA-KTG 309
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P ++ +EYY++LA
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTKRKLLEYYSVLAGGLP 68
Query: 310 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ +S NN ELG+ + +R+ ++I D G++++I
Sbjct: 69 IIFHSANNEELGSITERGHRLGCISIIDQGEAELI 103
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 67.3 bits (157), Expect = 5e-10
Identities = 34/92 (36%), Positives = 56/92 (60%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
++ L V+++GK +G KQ +K ++G AKLVI+A N P K +I+ A ++
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYE 60
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
+ G +++LG CGK Y V + + +PGDSDI+
Sbjct: 61 FPGMSVDLGPICGKPYVVSAVTVLEPGDSDIM 92
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 66.5 bits (155), Expect = 9e-10
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P +I+ Y +
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKIKSY----DVKILV 59
Query: 319 YSGNNIELGTACGKYYRVCTLAITD 393
Y+G N+ELG CGK + V +AIT+
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAITE 84
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 64.1 bits (149), Expect = 5e-09
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +1
Query: 136 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 315
+++ L +K+GK +G +T+ G AK+V++A N P K +++ V
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQE----TNVPVL 66
Query: 316 HYSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
Y G ++ELG CGK + + +AI D G+SDI+
Sbjct: 67 EYEGTSVELGPVCGKPFTIAAMAILDAGESDIL 99
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/96 (34%), Positives = 54/96 (56%)
Frame = +1
Query: 142 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 321
N L MK+G+ LG K + + KA+LVIIAKNAP ++ + A ++ +
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAPAQIRN---FLAANENVPLYEF 60
Query: 322 SGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
G++ +LG CG+ + + LAI + G+SDI++ E
Sbjct: 61 DGSSRQLGKECGRDHMISVLAIVNAGESDILSLKSE 96
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/92 (32%), Positives = 49/92 (53%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
++ +L + +G G +QTL +G A+LV++A N P ++ A + VH
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCPSDYIDDLR--ARHPEVTVHQ 60
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
N ELG ACGK + + T+ + D GDSD++
Sbjct: 61 APVVNRELGVACGKPFSISTICVLDAGDSDLL 92
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/98 (32%), Positives = 54/98 (55%)
Frame = +1
Query: 136 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 315
+I+ L +++GK LG +L+ +G AKL+I A + P + ++ + V+
Sbjct: 3 NIDRALRSSIRTGKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVY 58
Query: 316 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
Y + +LG ACGK + V LA+ +PGDS+I+ L E
Sbjct: 59 AYQSSGRDLGAACGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 172 GKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 351
GK +G +TLK L+ G+ V++AKN P K +IEYYA L+ V N ELG A
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVPDYIKEDIEYYAKLSNIPVIQVDLFNDELGAA 72
Query: 352 CGKYYRVCTLAI 387
K ++V + I
Sbjct: 73 LKKRFKVSVVGI 84
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 53.6 bits (123), Expect = 7e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +1
Query: 328 NNIELGTACGKYYRVCTLAITDPGDSDIITTLP 426
+N++LGTACGKY++V L+I DPGDSDII +P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = +1
Query: 160 VMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIE 339
+ K G K+T+K L K +IIA N K I +Y LL K +SGN+ E
Sbjct: 24 IKKKNNLVKGKKETIKNLISNKISFLIIASNCLIDTKLHIFHYCLLYKVKFCFFSGNSKE 83
Query: 340 LGTACGKYYRVCTLAI 387
LG C ++ C L I
Sbjct: 84 LGQLCDLKHKACILGI 99
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 44.8 bits (101), Expect = 0.003
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 309
I+ I + L L M++GK G + +++G KLVI+A +A I K
Sbjct: 3 IDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYKVP 62
Query: 310 VHHYSGNNIELGTACGKYYRVCTLAITDPG 399
+ GN ELG A GK RV + ITDPG
Sbjct: 63 FRKF-GNRNELGIALGKGERV-NVGITDPG 90
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 166 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 339
+SGK G +T K + +G+AKLVIIA++ P + + + LL K + Y +
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP--EEIVAHLPLLCDEKKIPYVYVSSKKA 85
Query: 340 LGTACGKYYRVCTLAITDPGDS 405
LG ACG + AI +PG++
Sbjct: 86 LGEACGLQVATASAAILEPGEA 107
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 775 VCVLGALPLPRSLTRCARXFGXGXRYQLT 861
+C G +PLPRSLTR AR FG G RY+LT
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 41.9 bits (94), Expect = 0.021
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 245 AMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDSMXFF--CFFAATIL 96
A+ T+ P R+VF V LYP Y PD +T REL+ S FF CF A L
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCFGAIFFL 165
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 41.5 bits (93), Expect = 0.028
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +1
Query: 133 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE----YYALLA 300
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P +I+ YY +
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGPNLTKKIQDKSHYYQVEI 63
Query: 301 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
T + +EL A GK +V LA+TD G + + +L E
Sbjct: 64 VTVF-----STLELSIAVGKSRKV--LAVTDAGFTKKMRSLME 99
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 41.5 bits (93), Expect = 0.028
Identities = 30/100 (30%), Positives = 50/100 (50%)
Frame = +1
Query: 100 MVAAKKQKKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 279
++ A KK + S+ L L K+G G T K++++GKA +VI+A++A K
Sbjct: 6 LLKAAATKKRVMSL---LGLATKAGYVASGEFSTEKSVKEGKACVVIVAEDASENTKKMF 62
Query: 280 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 399
++ + G +LG A GK +R +L+I D G
Sbjct: 63 RNMCTFYDVPIYIF-GEKTDLGHAIGKEFR-ASLSINDQG 100
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 41.1 bits (92), Expect = 0.037
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +1
Query: 739 CINESAXARGXAVCVLGALPLPRSLTRCARXFGXG 843
CI + A AR AV VL ALPL RS TRC R G G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300
>UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 101
Score = 41.1 bits (92), Expect = 0.037
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 309
+ + S + L ++GK G K ++ KAK+VI++ + K E K
Sbjct: 1 MNKVFSMIGLATRAGKTVAGEFSVEKAVKDNKAKVVIVSTESSDNTKKLFENKCKFYKIP 60
Query: 310 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 423
V Y G ELG A G R ++A+ DPG S I +
Sbjct: 61 VFIY-GTKAELGMATGNKER-ASIAVLDPGFSKSIVKM 96
>UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 93
Score = 40.7 bits (91), Expect = 0.049
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +1
Query: 163 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 342
MK+GK G T + GKAK VI+A +A K + K Y G+ L
Sbjct: 1 MKAGKCVSGETMTESETKSGKAKFVIVAGDASENTKKKFGDMCKFYKVPFCFY-GDKDTL 59
Query: 343 GTACGKYYRVCTLAITDPGDSD 408
G A GK +R +LAI D G +D
Sbjct: 60 GHAMGKEFR-ASLAILDEGFAD 80
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 39.5 bits (88), Expect = 0.11
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 309
+ +I S L L ++GK GY+ + LR K +LV++A++ P K+ I + +
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSPGLKTRILRFCREYRRQ 60
Query: 310 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 414
Y N ELG A GK + ITD + II
Sbjct: 61 GLLYGYKN-ELGAALGK-PPCAVVGITDKNFAFII 93
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +1
Query: 184 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACG 357
+G KQTLK LR GKA VIIA +A K + A A V + + +ELG ACG
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDADEHVKQALLDAAKQANVPVVNVP-SKLELGKACG 83
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 118 QKKXIESINSRLALVMKSGKYCLGYKQTLK 207
+++ +IN++L LVMKSGKY LGYK LK
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 38.3 bits (85), Expect = 0.26
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 184 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKY 363
+G KQTLK L Q + V+IAK+A P +++E A + + + Y + +LG ACG
Sbjct: 14 IGTKQTLKALEQEEVLEVVIAKDAEPRVVNKVEAMASVKQIPI-IYVDSMKKLGKACGID 72
Query: 364 YRVCTLAI 387
T+A+
Sbjct: 73 VGAATVAL 80
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 37.5 bits (83), Expect = 0.46
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 151 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 330
L L M++GK G + TLK +R KAK V +A++A + +I+ + V +
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIKDKSSYYNVPVSELF-S 69
Query: 331 NIELGTACGKYYRVCTLAITDPG 399
EL A G+ V + +TD G
Sbjct: 70 QFELSQAIGRPRMV--IGVTDAG 90
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 37.5 bits (83), Expect = 0.46
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +1
Query: 139 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 318
I S L L K+ K GY+ + L+ GKA+LVI+A++A K + K +
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDASQNTKKKFIDACNYRKVDIRI 65
Query: 319 YSGNNIELGTACGKYYRVCTLAITDPG 399
+ G LG GK R +A+ D G
Sbjct: 66 F-GKKELLGKFIGKDIR-SVIAVLDRG 90
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 35.9 bits (79), Expect = 1.4
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 151 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 330
L+ + ++ +G KQTLK L++GKA V IA +A ++ AL + V + +
Sbjct: 3 LSEIKETKNRTVGTKQTLKALQKGKAIKVFIALDAE--KRVTDPVVALCKEKNVPVETVD 60
Query: 331 NI-ELGTACGKYYRVCTLAITDPG 399
+ ELG +CG AI DPG
Sbjct: 61 TMAELGKSCGIAVGCACAAIIDPG 84
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 737 SALMNRPXRGXRRFAYW 787
+ALMNRP RG RRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 151 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYS 324
L++ ++GK G +T K + +G AKLV+IA++ P + + LL K + Y
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDP--PEVVAHLPLLCEEKKVPYVYV 95
Query: 325 GNNIELGTACGKYYRVCTLAITDPGDS 405
+ +LG A G + +PG +
Sbjct: 96 PSKEKLGKAAGINVSAAAAVVIEPGQA 122
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -3
Query: 809 ERGSGRAPNTQTAXPRAXADSLMQ 738
+R + APNTQTA PRA ADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 35.1 bits (77), Expect = 2.4
Identities = 31/103 (30%), Positives = 45/103 (43%)
Frame = +1
Query: 121 KKXIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 300
K E + S L L ++GK G TL L++GK L++IA++A K + +
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFR 61
Query: 301 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 429
+S E+G A GK R + I D S I L E
Sbjct: 62 NIPYLFFSTKE-EIGFAIGKSPR-AVVGIKDENFSKKIIELIE 102
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 551 MIRYIDEFGQTTTXMQ 598
MIRYIDEFGQTTT MQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L7Ae -
Picrophilus torridus
Length = 127
Score = 34.7 bits (76), Expect = 3.2
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 166 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY--ALLAKTGVHH-YSGNNI 336
K+GK G + +K++ +G++KLV+IA++ P +E+ YY L + V + Y
Sbjct: 26 KTGKVRKGTNEVVKSIERGESKLVVIAEDVSP---AEVVYYLPTLCEERKVPYVYVKKKS 82
Query: 337 ELGTACGKYYRVCTLAITDPGDSD 408
+LG G +++I D G +D
Sbjct: 83 DLGLKVG-IASAASVSIVDYGKND 105
>UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11;
Bacillus|Rep: Acetyl-CoA acetyltransferase - Bacillus
anthracis
Length = 363
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 CLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEIEYYALLAKTGVHHYSGNNIELGTAC 354
CL YK+TL+ L +G I++ N K E+ Y ++ +T + G +C
Sbjct: 157 CLSYKRTLQALAKGYIHEEILSFNGLLDESIKPEMNYERIIKRTKPAFLHNGTVTAGNSC 216
Query: 355 GKYYRVCTLAITDPGDS 405
G C + + + G +
Sbjct: 217 GVNDGACAVLVMEEGQA 233
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 34.3 bits (75), Expect = 4.3
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEI 279
I ++ L L++ +G Y + Y++T+K LR K + + KNA PL K I
Sbjct: 187 IVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPLLKGAI 238
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 34.3 bits (75), Expect = 4.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 169 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 267
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 33.9 bits (74), Expect = 5.7
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 130 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRK 270
+E I S L L ++GK G Q L++GK L+I+A++AP K
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAPGTHK 48
>UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Alkaliphilus metalliredigens QYMF|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Alkaliphilus
metalliredigens QYMF
Length = 103
Score = 33.5 bits (73), Expect = 7.5
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +1
Query: 133 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAK----NAPPLRKSEIEYYALLA 300
E + L L MKSG G + K L++GK L+++AK N L + YY +
Sbjct: 3 ERTKNLLGLGMKSGSLISGEENCKKELKKGKVYLILLAKDSSDNTTKLFNDKCTYYQVPI 62
Query: 301 KT-GVHHYSGNNI 336
+T G GN I
Sbjct: 63 RTVGTKEILGNCI 75
>UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Ferrous iron
transport protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 717
Score = 33.5 bits (73), Expect = 7.5
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 184 LGYKQTLKTLRQGK-AKLVIIAKNAPPLRKSEIEYYALLAKTG-VHHYSGNNIELGTACG 357
+G+K KTL++GK KLV+ P + KS + + L KT V ++ G +EL A
Sbjct: 5 IGHKSGTKTLQKGKDCKLVVALVGNPNVGKSTL-FNTLTGKTAHVANWPGVTVELEAAVS 63
Query: 358 KY 363
+Y
Sbjct: 64 RY 65
>UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3;
Lactobacillus|Rep: Ribosomal protein HS6-type -
Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC
BAA-365)
Length = 94
Score = 33.1 bits (72), Expect = 9.9
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +1
Query: 151 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 330
L L ++GK G L L++GK K +IIA + + +IE T +
Sbjct: 2 LGLATRAGKTVSGTDIVLAKLKKGKLKCIIIANDLAENSRGKIEAAVKAQPTPLVDVF-T 60
Query: 331 NIELGTACGKYYRVCTLAITDPG 399
EL A GK +V LA+TD G
Sbjct: 61 EAELSQAVGKKRKV--LALTDRG 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,794,856
Number of Sequences: 1657284
Number of extensions: 11006239
Number of successful extensions: 24512
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 23756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24499
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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