Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J16
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0081 + 22248963-22249016,22249120-22249165,22249259-222493...    53   3e-07
01_05_0668 - 24147412-24147618,24148019-24148286,24149506-241497...    51   1e-06
05_03_0449 - 14161812-14162902,14163121-14163153,14164248-141644...    34   0.16 
03_06_0483 - 34226496-34226864,34227140-34227360,34227677-342279...    33   0.29 

>05_05_0081 +
           22248963-22249016,22249120-22249165,22249259-22249357,
           22250178-22250337,22250858-22251128,22251295-22251486
          Length = 273

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = +1

Query: 487 ETPGAVPEAETQPQSN-HNFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIK 663
           + PG   + + + Q+N   ++ +  Y  YF+V T  VV+R+ISSV P     + F   I 
Sbjct: 60  QPPGTPADGDVETQTNWKGYFNVASYAPYFNVDTDVVVDRLISSVYPM----DGFFRKID 115

Query: 664 GXPDLYGPIWI 696
             PD+YGP+WI
Sbjct: 116 ANPDMYGPLWI 126



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 702 TLIFTIAVSGNIASYLQNVNKAVH-WRYDFHLVSYAA 809
           TLIF +A  GN A+YL      ++ W +D    ++AA
Sbjct: 129 TLIFMLAAFGNFATYLMQRKTDLNIWSFDVGYFNWAA 165


>01_05_0668 -
           24147412-24147618,24148019-24148286,24149506-24149728,
           24149822-24149996
          Length = 290

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/50 (50%), Positives = 30/50 (60%)
 Frame = +1

Query: 544 WTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIKGXPDLYGPIW 693
           +++  Y+ YFDV TS+VVERI  SV P    R  F E     PDLYGP W
Sbjct: 92  FSVAAYKPYFDVDTSDVVERIWESVFP---FRGTFTEKTSENPDLYGPFW 138



 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 702 TLIFTIAVSGNIASYLQNVNKAVHWRYDFHLVSYAA 809
           TLIF  A      +YL +      W YD +LV+++A
Sbjct: 142 TLIFVAASIATFVTYLSHKWHKKEWNYDINLVTWSA 177


>05_03_0449 - 14161812-14162902,14163121-14163153,14164248-14164457,
            14166348-14167011,14167129-14167287,14167449-14167563,
            14167672-14167867,14167965-14168286,14168695-14168865,
            14169486-14169495,14169932-14170285,14172429-14172553
          Length = 1149

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 485  TKRPELFQKQRLNLSRITTS-GQ*SIIRNTLMCRP--VKLWRGLYHQYCPRKSLETILMR 655
            + RP L +  R+ LS  T S  Q + +  +++C    +KL R LY Q  P   L     R
Sbjct: 954  SSRPHLLKSGRMTLSSATCSVEQIASLAASMLCHAGGIKLVRLLYEQILPTMLLSAGEAR 1013

Query: 656  XSKANLICMDLSGF 697
               A  +C    GF
Sbjct: 1014 LGSAGPVCSSFEGF 1027


>03_06_0483 -
           34226496-34226864,34227140-34227360,34227677-34227933,
           34228388-34228483,34228660-34228805,34229774-34229977
          Length = 430

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 711 FTIAVSGNIASYLQNVNKAVHWRYDFHLVS 800
           F IA +G+ +S L +V K + WR  FH+++
Sbjct: 158 FYIAANGDFSSLLSSVKKTIRWRETFHILT 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,863,588
Number of Sequences: 37544
Number of extensions: 338542
Number of successful extensions: 724
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)