Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J16
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    66   4e-11
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    66   4e-11
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    66   4e-11
Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical pr...    38   0.007
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr...    32   0.59 
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U88181-3|AAB42302.2|  523|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 24/53 (45%), Positives = 41/53 (77%)
 Frame = +1

Query: 538 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIKGXPDLYGPIWI 696
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+
Sbjct: 72  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWV 122



 Score = 32.7 bits (71), Expect = 0.34
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 696 SLTLIFTIAVSGNIASYLQNVNKAVHWRYDFHLVSYAAXAI 818
           S+TL+F I + GN+A +++N      +  DF +V+ A+  I
Sbjct: 123 SVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLI 163


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 24/53 (45%), Positives = 41/53 (77%)
 Frame = +1

Query: 538 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIKGXPDLYGPIWI 696
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+
Sbjct: 62  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWV 112



 Score = 32.7 bits (71), Expect = 0.34
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 696 SLTLIFTIAVSGNIASYLQNVNKAVHWRYDFHLVSYAAXAI 818
           S+TL+F I + GN+A +++N      +  DF +V+ A+  I
Sbjct: 113 SVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLI 153


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 24/53 (45%), Positives = 41/53 (77%)
 Frame = +1

Query: 538 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIKGXPDLYGPIWI 696
           NF++ EYYQ++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+
Sbjct: 62  NFFSFEYYQQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWV 112



 Score = 32.7 bits (71), Expect = 0.34
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 696 SLTLIFTIAVSGNIASYLQNVNKAVHWRYDFHLVSYAAXAI 818
           S+TL+F I + GN+A +++N      +  DF +V+ A+  I
Sbjct: 113 SVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLI 153


>Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical
           protein Y53C12A.3 protein.
          Length = 557

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 20/50 (40%), Positives = 31/50 (62%)
 Frame = +1

Query: 538 NFWTIEYYQKYFDVQTSEVVERIISSVLPQKVSRNYFDEXIKGXPDLYGP 687
           ++  I+ ++ YFDV  +EV  R+I S +P+K S+      I+  PDLYGP
Sbjct: 87  SYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQ------IQVSPDLYGP 130


>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
            T21E8.1b protein.
          Length = 1204

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 684  TYLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            TYL  +TL  T  ++G+ A+YL +  KAVH     FHL +Y A
Sbjct: 897  TYLVLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPA 939


>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.1a protein.
          Length = 1263

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 684  TYLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            TYL  +TL  T  ++G+ A+YL +  KAVH     FHL +Y A
Sbjct: 956  TYLVLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPA 998


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.2 protein.
          Length = 1263

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 684  TYLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            TYL   TL  T  ++G+ A+YL +  KAVH     FHL +Y A
Sbjct: 956  TYLILETLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPA 998


>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
            C05A9.1 protein.
          Length = 1283

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 684  TYLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            TYL  +TL  T + +G+  +YL +  KA+H     FHL +Y A
Sbjct: 976  TYLVLMTLSMTASYAGSAVAYLPDHRKAIHAAGLIFHLFTYPA 1018


>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
            T21E8.3 protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 687  YLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            YL  +TL +T  ++G+  SY+ +  KA+H     F+L +Y A
Sbjct: 943  YLSLITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTYPA 984


>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
            T21E8.3 protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 687  YLDSLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAA 809
            YL  +TL +T  ++G+  SY+ +  KA+H     F+L +Y A
Sbjct: 943  YLSLITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTYPA 984


>U88181-3|AAB42302.2|  523|Caenorhabditis elegans Hypothetical
           protein C55B6.1a protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 632 SLET-ILMRXSKANLICMDLSGFIDSDL 712
           SLET +LMR SK+N++C++ S    S +
Sbjct: 185 SLETWLLMRSSKSNILCVEASNISPSGM 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,376,644
Number of Sequences: 27780
Number of extensions: 338652
Number of successful extensions: 730
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)