Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J14
         (974 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   1.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   2.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 1.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 497 PPXPPPPXXKKNPIXXP 447
           PP PPPP    +P   P
Sbjct: 784 PPPPPPPPSSLSPGGVP 800



 Score = 21.4 bits (43), Expect(2) = 1.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -1

Query: 533 PXXXXFXXXXKXPPXPPPP 477
           P    F      PP PPPP
Sbjct: 771 PSRSAFADGIGSPPPPPPP 789


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect(2) = 2.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 492 PPXPPPXXKKPNTXXXSPLFFP 427
           PP PPP    P+     PL  P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 20.6 bits (41), Expect(2) = 2.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -3

Query: 495 PPPXPPP 475
           PPP PPP
Sbjct: 581 PPPAPPP 587


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,212
Number of Sequences: 2352
Number of extensions: 3716
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)