Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J14
         (974 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    32   2.8  
X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.            31   6.4  
M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.            31   6.4  
CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.                  31   6.4  
BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.          31   6.4  
BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.          31   6.4  
BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.          31   6.4  
AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227] ...    31   6.4  
AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.           31   6.4  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   8.4  

>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
 Frame = -3

Query: 684  YSXXFPLSXXKTPXPPPFXXSPP-PPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXX 508
            Y   +P+S      PPP    PP PP      S   +             PP  P     
Sbjct: 1944 YDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPP 2003

Query: 507  XKKXPPPXPPPXXKKP 460
                PPP PPP    P
Sbjct: 2004 PPPPPPPPPPPPPSAP 2019


>X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227]
           protein.
          Length = 227

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 4   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 61

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 62  GGFHSGGNRGR 72


>AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.
          Length = 318

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 23/71 (32%), Positives = 27/71 (38%)
 Frame = +2

Query: 461 GFFXXGGGXGGGXFFXXXKXXGXRGGXXGFXXYXXYFCXKKKKEXVXXXXGGGGEX*KGG 640
           GF   GGG GG   F      G RGG  G       F  + +        GGGG   +GG
Sbjct: 1   GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGF--RGRGRGGGGGGGGGGGGGRGG 58

Query: 641 GXGVFXXXRGK 673
           G       RG+
Sbjct: 59  GGFHSGGNRGR 69


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = -3

Query: 648 PXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPPPXPPP 475
           P PPP    PPPP      S+             P  PP  P +       PPP  PP
Sbjct: 76  PPPPPQQPPPPPPPPSPGASY-----------PPPQPPPPPPLYQRVSPPQPPPPQPP 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,351,495
Number of Sequences: 237096
Number of extensions: 942769
Number of successful extensions: 13963
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8401
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)