Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J14
(974 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.54
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.54
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.54
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.94
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 1.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 24 2.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 25 4.3
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 25 4.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 23 4.6
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 23 4.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 8.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 8.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 25 9.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 25 9.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPP 490
PL+ +P PPP SPPPP P PP PP
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPP---------PPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 489 PXPPPXXKKPNTXXXSP 439
P PPP P P
Sbjct: 299 PPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPP 490
PL+ +P PPP SPPPP P PP PP
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPP---------PPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 489 PXPPPXXKKPNTXXXSP 439
P PPP P P
Sbjct: 320 PPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPP 490
PL+ +P PPP SPPPP P PP PP
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPP---------PPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 489 PXPPPXXKKPNTXXXSP 439
P PPP P P
Sbjct: 305 PPPPPRGSPPTGSLPPP 321
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -1
Query: 545 PXXPPXXXXFXXXXKXPPXPPPPXXKKNPIXXPXLXFFSPIXXXKKNLP 399
P PP PP PPPP K P P L +P K P
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTP 118
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPPXXKKPNT 454
P PP P K PP PPP +KP++
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPPAQQKPSS 185
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -3
Query: 648 PXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPPPXPPP 475
P PPP PPPP + P PP P PPP PPP
Sbjct: 533 PAPPPVSSIPPPPPIAGLLA--------ANGTNVPIPPPPPPPLPQNLSGAPPPPPPP 582
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 497 PPXPPPPXXKKNPIXXPXLXFFSPI 423
PP PPP K P P F+P+
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 545 PXXPPXXXXFXXXXKXPPXPPPP 477
P PP PP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 497 PPXPPPPXXKKNPIXXPXLXFFSPI 423
PP PPP K P P F+P+
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 545 PXXPPXXXXFXXXXKXPPXPPPP 477
P PP PP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 497 PPXPPPPXXKKNPIXXPXLXFFSPI 423
PP PPP K P P F+P+
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAPM 379
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 545 PXXPPXXXXFXXXXKXPPXPPPP 477
P PP PP PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPP 331
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPPXXKKPN 457
P PP P K PP PPP +KP+
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPP 610
P P P P+ PPPP
Sbjct: 116 PYPQHAVPAPAPYQQQPPPP 135
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPP 475
P PP P + PPP P P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPPAP 155
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPP 490
P+ ++ PPP PPPP + + P PP P PP
Sbjct: 756 PIQQQQSSIPPP---PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Query: 489 PXPP 478
P PP
Sbjct: 813 PPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKKXPP 490
P+ ++ PPP PPPP + + P PP P PP
Sbjct: 756 PIQQQQSSIPPP---PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Query: 489 PXPP 478
P PP
Sbjct: 813 PPPP 816
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Frame = -3
Query: 681 SXXFPLSXXKTPXPPPFXXSPPPPXXXXTX-----SFFFLXQK*XX*XXXPXXPPLXPXF 517
S F S +P PPP PPPP T K P PP P F
Sbjct: 1325 SDSFSTSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP-PPLF 1383
Query: 516 XXXXKKXPPPXPPPXXKKPN 457
PPP P P +K N
Sbjct: 1384 SPSMILPPPPPPLPSEEKKN 1403
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPPXXKKPNTXXXSPL 436
P PP P PPP PPP K T P+
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPV 1376
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = -3
Query: 672 FPLSXXKT--PXPPPFXXSPPPPXXXXTXSFFFLXQK*XX*XXXPXXPPLXPXFXXXXKK 499
FP+S + PP P PP + Q P PPL P
Sbjct: 453 FPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVP 512
Query: 498 XPPPXPPP 475
PPP PPP
Sbjct: 513 PPPPPPPP 520
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 25.0 bits (52), Expect(2) = 4.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPP 610
P + +T PPP +PPPP
Sbjct: 125 PPNPPRTCCPPPTPAAPPPP 144
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 495 PPPXPPPXXKKP 460
PPP PPP + P
Sbjct: 144 PPPPPPPAPEAP 155
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 25.0 bits (52), Expect(2) = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPP 610
P+ P PPP PPPP
Sbjct: 350 PIISPPAPPPPPPPPPPPPP 369
Score = 22.6 bits (46), Expect(2) = 4.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 495 PPPXPPPXXKKPNTXXXSPLFFP 427
PPP PPP + + S F P
Sbjct: 361 PPPPPPPPPPQTPSASSSVTFSP 383
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 23.4 bits (48), Expect(3) = 4.6
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 669 PLSXXKTPXPPP--FXXSPPPP 610
P S +P PPP SPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPP 310
Score = 21.0 bits (42), Expect(3) = 4.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 504 KKXPPPXPPP 475
++ PPP PPP
Sbjct: 304 EESPPPPPPP 313
Score = 21.0 bits (42), Expect(3) = 4.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 495 PPPXPPPXXKKPN 457
PPP PPP N
Sbjct: 308 PPPPPPPVASVSN 320
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 23.4 bits (48), Expect(3) = 4.6
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 669 PLSXXKTPXPPP--FXXSPPPP 610
P S +P PPP SPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPP 310
Score = 21.0 bits (42), Expect(3) = 4.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 504 KKXPPPXPPP 475
++ PPP PPP
Sbjct: 304 EESPPPPPPP 313
Score = 21.0 bits (42), Expect(3) = 4.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 495 PPPXPPPXXKKPN 457
PPP PPP N
Sbjct: 308 PPPPPPPVASVSN 320
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 551 KXPXXPPXXXXFXXXXKXPPXPPPPXXKKNPIXXP 447
K P PP PP PPPP + I P
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGP 521
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPPXXKKPNTXXXSP 439
P PP P K PPP PP +P SP
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 109
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPPXXKKPNTXXXSP 439
P PP P K PPP PP +P SP
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 331
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPP 610
P +TP PP PPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPP 330
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPP 475
P PP P PPP PP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPP 382
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 669 PLSXXKTPXPPPFXXSPPPP 610
P +TP PP PPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPP 320
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -3
Query: 546 PXXPPLXPXFXXXXKKXPPPXPPP 475
P PP P PPP PP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPP 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,563,228
Number of Sequences: 27780
Number of extensions: 118570
Number of successful extensions: 1845
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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