Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J07
(945 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 43 4e-04
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 37 0.027
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.34
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.44
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 32 0.78
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.78
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.78
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 1.0
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.8
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 30 3.1
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 3.1
SB_47581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 4.1
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 4.1
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.5
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 5.5
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 5.5
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 29 5.5
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 7.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 7.2
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 7.2
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 7.2
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 9.6
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXG 596
PP GG G PPPPPP G PP PP GG P P G
Sbjct: 663 PPPPPPGGQAGGAPPPPPPPLPGGAAPPP-----PPPIGGGAPPPPPPG 706
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 36.7 bits (81), Expect = 0.027
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXG 596
PP GG PPPPPP PP G P GN P P G
Sbjct: 355 PPPVGGAAP----PPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPG 399
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXP 644
G PPPPP PP G PP ++P P G P G P
Sbjct: 323 GTAPPPPPPSRSSQRPPPPSRGAPPPP-SMGMAPPPVGGAAPPPPPPPPVGGPP 375
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
G PPPPP G PP G PP +P P
Sbjct: 284 GIQPPPPPS--RGAAPPPPSRGAPPPPPSRGSAPPP 317
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 492 PPPPPKXXXGXXXPPAXTGXXPP 560
PPPPP PPA G PP
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPP 327
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPP--------PPPKXXXGXXXPP--AXTGXXPPXGGNXVSPKPXG 596
PP G GG G PPP PPP G PP A G PP G P P G
Sbjct: 538 PPGAGQGG---GPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPG 593
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXT--GXXPPXGGNXVSPKPXG 596
PP G G G PPPP G P A G PP G P P G
Sbjct: 503 PPPPGAG--QGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPG 551
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 12/56 (21%)
Frame = +3
Query: 465 GGGXXXGXPP--------PPPPKXXXGXXXPPAXT----GXXPPXGGNXVSPKPXG 596
GGG G PP PPPP G PP G PP G P P G
Sbjct: 485 GGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPG 540
Score = 31.1 bits (67), Expect = 1.4
Identities = 33/126 (26%), Positives = 36/126 (28%)
Frame = +3
Query: 192 GXXPPGXXXPXXXGXGPPTXXXTXXXXGXPXPKXGEKNAXXXKTXXQWXXXKPXXXAKXX 371
G PPG G GPP G P P G+ Q P +
Sbjct: 491 GQPPPGAGQ----GGGPPPPG-AGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGG 545
Query: 372 XPPXMXSXXXSXSXGXXGRFFXXXXTPPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGX 551
PP + G PP G GG PPPP G P A G
Sbjct: 546 GPPPPGAGQ-GWGQPPPGAGQGGGPPPPGAGQGG------PPPPGAGQEGPPPPGAGQGG 598
Query: 552 XPPXGG 569
PP G
Sbjct: 599 GPPPPG 604
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 492 PPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXPKTA 653
PPPPP G PP T PP P P P S G P A
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPSEGKCGRKPAGA 427
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +3
Query: 465 GGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP---XGXPXKTIXSXXPXG 635
GGG G PPPPP PP PP N P P G P + P
Sbjct: 340 GGG---GVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Query: 636 XXPKT 650
P T
Sbjct: 397 PPPPT 401
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXPP 560
G PPPPPP G PP T PP
Sbjct: 383 GPPPPPPP--TNGPPPPPPPTNGPPP 406
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 465 GGGXXXGXPPPPPPKXXXGXXXPPA 539
GG PPPPPP G PP+
Sbjct: 69 GGAPSTPAPPPPPPPPSSGPPLPPS 93
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXPPXG 566
G PPPPPP G PP T P G
Sbjct: 393 GPPPPPPP--TNGPPPPPPPTNGPPSEG 418
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXP 629
G PPPPPP P PP P P G P K P
Sbjct: 775 GAPPPPPPPTKPATPRVPPNIPSRPPGARPTPPPPPPGKPTKPTKPSLP 823
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTG----XXPPXGGNXVSPKP 590
PPPPPP PP G PP GGN P P
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPP 957
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXG 596
PP GG PPPPP PP PP +P P G
Sbjct: 923 PPPPGGNAPL---PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG 968
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 8/59 (13%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPP-----PPPPKXXXGXXXPPAXTG---XXPPXGGNXVSPKPXGXP 602
PP GG PP PPPP G PP G PP GG+ P P P
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPP--PPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPP 990
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 10/59 (16%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPP--------PPPKXXXGXXXPPAXTGXXPPXGGN--XVSPKPXG 596
PP GG PPP PPP PP G PP GG + P P G
Sbjct: 921 PPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGG 979
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 595 PXGLGETXFPPXGGXXPVXAGGXXXPXXFLGGGGGGXPXXKPPPP 461
P G PP GG P GG P GG P PPPP
Sbjct: 948 PGGNAPPPPPPPGGSAPPPGGGAP-PLPPPPGGSAPPPPPPPPPP 991
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPP 560
PP GG G PP P G PP PP
Sbjct: 956 PPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXP 557
PP G G PPPPPP G PPA G P
Sbjct: 198 PPPPPPPGFPGGAPPPPPP--PFGAPPPPALNGGPP 231
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXT-GXXPPXGGNXVSPK 587
PPPPPP G PP G PP N P+
Sbjct: 199 PPPPPPGFPGGAPPPPPPPFGAPPPPALNGGPPR 232
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPP 536
PP GG PPPPPP G PP
Sbjct: 306 PPPPPGGAPPPPPPPPPPPPGDGGAPPPP 334
Score = 31.9 bits (69), Expect = 0.78
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PP G PPPPPP PP PP G+ +P P P
Sbjct: 292 PPPPPADGSAPAPPPPPPP-----GGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 7/54 (12%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPP-------PPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
P GGG PPP PPP G PP PP G P P
Sbjct: 281 PDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPP 334
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXT 545
PP GG PPPPPP PP T
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGGAPPPPPPPT 338
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 32.3 bits (70), Expect = 0.59
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTG----XXPPXGGNXVSPKPXGXP 602
PP GG G PPP PP PP T PP G P P P
Sbjct: 388 PPWSKPGGILPGPPPPGPPMLNMAPSIPPWQTTPGYIPPPPPGFPQFQPPPPPPP 442
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 31.9 bits (69), Expect = 0.78
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +3
Query: 450 PPXXGG----GGXXXGXPPPPPPKXXXGXXXPP 536
PP GG GG G PPPPPP PP
Sbjct: 209 PPPMGGPPPMGGPPGGYPPPPPPPGAGDPAYPP 241
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.9 bits (69), Expect = 0.78
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 483 GXPPP-PPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXPKTAF 656
G PP PPP PP T PP G + P G P S P G +T F
Sbjct: 2178 GAPPSGPPPMGAPPSGPPPMGT---PPSGHPPMGAPPMGPPPSGSHSPAPRGTISQTCF 2233
Score = 28.3 bits (60), Expect = 9.6
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +3
Query: 375 PPXMXSXXXSXSXGXXGRFFXXXXTPPXXGGGGXXXGXPPPPPPKXXXGXXXPP--AXTG 548
PP M G G PP G G PPP P P A
Sbjct: 2115 PPSMGRYNTPPPMGQYGAPARPAMGPPPMGSS--RYGPPPPMGPARHSPSGPSPLGAPPS 2172
Query: 549 XXPPXGGNXVSPKPXGXP 602
PP G P P G P
Sbjct: 2173 VPPPMGAPPSGPPPMGAP 2190
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 31.9 bits (69), Expect = 0.78
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
PP G G G PP G PP G PP G P P
Sbjct: 253 PPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQGYGPPP 299
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXG 596
PP G G G PP G PP G PP G P P G
Sbjct: 280 PPGQQGYGPPPGQQGYGPPPGQQGYGSPPGQQGYGPPPGQQGYGP-PAG 327
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +3
Query: 447 TPPXXGGGGXXXGXPPPP----PPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
+P G G G PP PP G PP G PP G P P
Sbjct: 230 SPGQHQGYGTLPGPPPGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPP 281
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
PP G G G PP G PP G PP G P
Sbjct: 262 PPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQGYGPPPGQQGYGSPP 308
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = +3
Query: 432 FXXXXTPPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGN 572
F PP GGG PPPPPP G PP PP GN
Sbjct: 648 FFGGIPPPPPGGG----MFPPPPPPPPGGGVPGPP-----KPPPPGN 685
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 568 PPXGGXXPVXAGGXXXPXXFLGGGGGGXPXX-KPPPP 461
P GG P GG P GGG P KPPPP
Sbjct: 647 PFFGGIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 375 PPXMXSXXXSXSXGXXGRFFXXXXTPPXXGGGGXXXGXPPPPPPKXXXGXXXPPA 539
PP G G + PP GG G PPPPP G PPA
Sbjct: 606 PPHGGHPHHPPPTGYPGGYPGTHTAPP---AGGYPTGQHPPPPPAGYPGYGPPPA 657
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +3
Query: 483 GXPPPPPPKXXXGXXXPPAXTGXXP----PXGGNXVSPKPXGXP 602
G P P P G PP +G P P GG+ P P G P
Sbjct: 578 GYPAPTPSYPQPGTYPPPHPSGGYPQPSPPHGGHPHHPPPTGYP 621
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKT 611
PPPPPP PP PP + P G P T
Sbjct: 692 PPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGT 732
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXPKT 650
PPPPPP+ PP PP P P + P P T
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPT 257
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTG-XXPPXGGNXVSP---KPXGXP 602
PP G G G PPP P G P G PP G +P +P G P
Sbjct: 45 PPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPPPSGQYGAPPTSQPYGAP 99
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +3
Query: 468 GGXXXGXPP--PPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXX 641
GG PP PPPP G PP G PP G P P G P P
Sbjct: 448 GGGPPQLPPNLPPPPGGMRGMPPPPM--GMYPPPRG--FPPPPFGPPPPFYRGPPPPRGM 503
Query: 642 P 644
P
Sbjct: 504 P 504
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAX----TGXXPPXGGNXVSPKPXGXP 602
PP G PPPPPP PA PP GG P P P
Sbjct: 151 PPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPP 536
PP GG PPPPPP PP
Sbjct: 189 PPPSGGPPPPPPPPPPPPPPPILELAAPP 217
>SB_47581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 447 TPPXXGGGGXXXGXPPPPPP 506
TP GGGG PP PPP
Sbjct: 5 TPQVGGGGGGSASFPPSPPP 24
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PP G PPPPPP G PP P G + P P P
Sbjct: 701 PPPLLSGTLPMPPPPPPPPPGCAGLPPPP----PSPQPGCAGLPPPPPPPP 747
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 453 PXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
P G PPPPPP P PP G + P P
Sbjct: 684 PVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPP 729
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTI 614
PP G PPPPP PP P G P P P K +
Sbjct: 713 PPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVPMKPL 767
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PPPPPP G P PP P P P
Sbjct: 697 PPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQP 734
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PPPPPP PP PP P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXP 644
PPPPPP PP PP P P P P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PPPPPP PP PP P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PPPPPP PP + PP P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXPKTAFXLA 665
PPPPPP P PP P P P P P A LA
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLA 437
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXP 629
PPPPPP PP PP P P P + P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPP 506
P G GG PPPPPP
Sbjct: 784 PEGEGVGGITPPPPPPPPP 802
Score = 21.4 bits (43), Expect(2) = 4.5
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3
Query: 489 PPPPPPK 509
PPPPPP+
Sbjct: 800 PPPPPPE 806
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 568 PPXGGXXPVXAGGXXXPXXFLGGGGGGXPXXKPPPPXXGGVXXXXKNLPXXP 413
PP G P P + G GG P PPP GG+ + P P
Sbjct: 248 PPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPPP 299
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPP 560
PPPPPP PP T PP
Sbjct: 301 PPPPPPTDFAPPPPPPEPTSELPP 324
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/54 (25%), Positives = 17/54 (31%)
Frame = +3
Query: 495 PPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXPXGXXPKTAF 656
PP P+ PP PP +P P P + S P P F
Sbjct: 70 PPAPQPVPNNMGPPPHVNQGPPPNSANQAPPPNPGPSPSFNSQGPPQRLPLQGF 123
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXP 602
PP G G P PK G PP G P G + P G P
Sbjct: 44 PPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPGLP 94
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKPXGXPXKTIXSXXP 629
PP G G P PP P+ G P G P G N P G P P
Sbjct: 272 PPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG----PLGPPGDVGPPGNP 327
Query: 630 XG 635
G
Sbjct: 328 GG 329
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
PPPPPP PPA + P G S P
Sbjct: 870 PPPPPPPPPPPPPPPPASSTGSTPGGDKVPSVGP 903
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Frame = +3
Query: 432 FXXXXTPPXXGGGGXXXGXPPPPP------PKXXXGXXXPPAXTGXXPPXGGN 572
F PP G PPPP K G PP G PP GN
Sbjct: 128 FRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGN 180
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 453 PXXGGGGXXXGXPPPPPPKXXXGXXXPP-AXTGXXPPXGGNXVSPKPXGXP 602
P G PPPPP PP +G PP G S + P
Sbjct: 182 PTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPP 232
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP--XGXPXKTIXSXXP 629
PPPP G PP PP G+ P P G P + + P
Sbjct: 250 PPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 298
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPP--KXXXGXXXPP 536
PP G G PPPPPP + G PP
Sbjct: 358 PPPPGRAPQPLGGPPPPPPGRRPPSGKINPP 388
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 492 PPPPPKXXXGXXXPPAXTGXXPPXG--GNXVSPKPXGXP 602
PPPPP G P G P G G P P G P
Sbjct: 1662 PPPPPPPAPGPPGPDGPMGLPGPQGPDGPKGPPGPPGLP 1700
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Frame = +3
Query: 432 FXXXXTPPXXGGGGXXXGXPPPPP------PKXXXGXXXPPAXTGXXPPXGGN 572
F PP G PPPP K G PP G PP GN
Sbjct: 40 FRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGN 92
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 453 PXXGGGGXXXGXPPPPPPKXXXGXXXPP-AXTGXXPPXGGNXVSPKPXGXP 602
P G PPPPP PP +G PP G S + P
Sbjct: 94 PTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPP 144
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 489 PPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP--XGXPXKTIXSXXP 629
PPPP G PP PP G+ P P G P + + P
Sbjct: 162 PPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 210
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 450 PPXXGGGGXXXGXPPPPPP--KXXXGXXXPP 536
PP G G PPPPPP + G PP
Sbjct: 270 PPPPGRAPQPLGGPPPPPPGRRPPSGKINPP 300
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 423 GRFFXXXXTPPXXGGGGXXXGXPPPPPPKXXXGXXXPPAXTGXXPPXGGNXVSPKP 590
GR P GG G G PPP PP P +G PP P P
Sbjct: 206 GRGMGKRFPPGRPGGPGMPPGGPPPFPPTSDPNMGHHPPISG--PPTTSMSGPPIP 259
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 453 PXXGGGGXXXGXPPPPP--PKXXXG 521
P GGGG G PPPP PK G
Sbjct: 713 PSPGGGGGHSGTPPPPEIGPKSFYG 737
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,361,219
Number of Sequences: 59808
Number of extensions: 248073
Number of successful extensions: 1590
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2764790632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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