Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J05
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   210   6e-56
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   4.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   7.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  210 bits (512), Expect = 6e-56
 Identities = 99/139 (71%), Positives = 118/139 (84%)
 Frame = +2

Query: 89  IKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 268
           IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+PK 
Sbjct: 8   IKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQ 67

Query: 269 KAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI 448
           KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAI
Sbjct: 68  KAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAI 127

Query: 449 LEDLVFPAEIVGKRIRXQV 505
           LEDLVFPAE+VGKRIR ++
Sbjct: 128 LEDLVFPAEVVGKRIRVKL 146



 Score = 64.1 bits (149), Expect = 6e-12
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = +3

Query: 501 KLDGSQLIKVHLDKNQQTTIEHKVDTFQXCIQEANGTRSDLRVPRNLI 644
           KLDGSQLIKVHLDKNQQTTIEHKVDTF    ++  G       P N +
Sbjct: 145 KLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 597 EANGTRSDLRVPRNLICKPSL*LYN 671
           E  G R DLR+P + I KP + +YN
Sbjct: 106 EYGGVR-DLRIPPHRIWKPDVLMYN 129


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 597 EANGTRSDLRVPRNLICKPSL*LYN 671
           E  G R DLR+P + + KP + +YN
Sbjct: 74  EYGGVR-DLRIPPHRLWKPDVLMYN 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,352
Number of Sequences: 2352
Number of extensions: 12846
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)