Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J05
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 26 0.54
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 2.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 8.7
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 25.8 bits (54), Expect = 0.54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 113 DSFETSISQALVELETNSDLKAQLRE 190
++ T++S AL EL N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 591 IQEANGTRSDLRVPRNLICKPSL*LYN 671
+ + G R DLR+P + + KP + +YN
Sbjct: 89 VSDYGGVR-DLRIPPHRLWKPDVLMYN 114
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 362 LPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRXQVGRL 514
L +H+ R + QK T+T Y +LVF A++ + +GR+
Sbjct: 83 LNSEAHRIRWESVQKEV---TVTGTYQLTETELVFGAKLAWRNATRCIGRI 130
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 56 GGVKDLRITPNKLWKPDILMYN 77
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 606 GTRSDLRVPRNLICKPSL*LYN 671
G DLR+ N + KP + +YN
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 8.7
Identities = 16/78 (20%), Positives = 32/78 (41%)
Frame = +2
Query: 218 ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVAN 397
EL KS + +P+P + + + +KK +G F + + + +
Sbjct: 552 ELKRLKSTVSLLPLPLARTPSVMSASSTCKKDKKNAGSGSRFTIYKANKASKKKREKSSA 611
Query: 398 KQKRPRSRTLTSVYDAIL 451
K++R ++TL V L
Sbjct: 612 KKERKATKTLAIVLGVFL 629
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,572
Number of Sequences: 438
Number of extensions: 3331
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -