Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J04
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.025
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.043
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.23
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.23
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.53
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 29 0.71
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 28 1.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.8
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 3.8
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 26 6.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.7
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.025
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 785 LPPXKXPPXPPPGXPPXAPSXQPPXXXPP 871
LPP PP PPP P P QPP PP
Sbjct: 4 LPPGNPPPPPPP--PGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPP 832
P P PP PP PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 788 PPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPGXXPXXRG 931
PP PP PP PP P PP + P P P P G
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQP--PXXXPPSXXGGPSPXHHPGXXP 919
P P P PP PP PP P P P P + P P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHP 907
P +PP P PP P + PP PPS SP + P
Sbjct: 230 PPIPP-SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +2
Query: 776 NPXLPPXKXPPXPPPGXPPXAPSXQ---PPXXXPPSXXGGPSPXHHPGXXP 919
NP PP P P PP + + PP PPS P P P
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPGXXP 919
P LPP PP P G P P PP G P+ P P
Sbjct: 429 PSLPP-SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 513 PXGXPPXPGXXAGGXGXXPPGAXXPVPPXXRGPPPXKXXEQXXXKXPXTGXRPPXXXXXP 692
P PP AG P G P PP R P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 693 XRSA 704
RSA
Sbjct: 397 GRSA 400
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
P LPP P P P AP P PP P+P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP-APAP 484
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 785 LPPX--KXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
LPP PP PPP P PP + P+P
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXPPXAP 841
P LPP P P P P AP
Sbjct: 467 PPLPPAAPAPPPAPAPAPAAP 487
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 773 PNPXLPPXKXPPXP-PPGXPPXAPSXQPPXXXPPSXXGGPSP 895
P P PP PP P P P PS PP S P+P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHP 907
P PP P PPP PP S PP PP G PS P
Sbjct: 1694 PQSAAPPQMSAPTPPP--PPM--SVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPG 910
P P PP P PP PP P+ P P H G
Sbjct: 1716 PPPSAPPM--PAGPPSAPPPPLPASSAPSVPNPGDRSALLQQIHTG 1759
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/53 (41%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -2
Query: 909 PGWCXGEGPPXX-EGGXXXG-GCXXGAXGGXPGGGXGGXFXGGRXGXGNXXXG 757
PG G G GG G G G GG GGG GG GGR G G G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGA-RGGRGGRGGARGG 56
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +2
Query: 779 PXLPPXKXPPXPPP--GXPPXAPSXQPPXXXPPSXXGGPSP 895
P PP + PP P P G PP P P PS P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 519 GXPPXPGXXAGGXGXXPPGAXXPVPPXXRGPPP 617
G PP P AG PP PVP G PP
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPS 874
P P PP PP P +P+ +PP PPS
Sbjct: 961 PRPAAPPSIPPPLPVSNI-LSSPTSEPPKDHPPS 993
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPS 892
P LP PP P P P P P S G PS
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 513 PXGXPPXPGXXAGGXGXXPPGAXXPVPPXXRGPPP 617
P PP P G PP PVP G PP
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
P+ +PP P P G PP P + P PS P P
Sbjct: 1174 PSSGIPPV---PKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/54 (25%), Positives = 14/54 (25%)
Frame = +3
Query: 513 PXGXPPXPGXXAGGXGXXPPGAXXPVPPXXRGPPPXKXXEQXXXKXPXTGXRPP 674
P G PP P P P P G PP P PP
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +2
Query: 779 PXLP-PXKXPPXPPPG--XPP-XAPSXQPPXXXPPSXXGGPSPXHHPGXXP 919
P +P P PP P P PP APS PP PS P P G P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPP-VPKPSVAAPPVPAPSSGIPP 1180
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
P +P K PP P P APS P PS SP
Sbjct: 1227 PPVPVPTAKAPPVPAPS--SEAPSVSTPRSSVPSPHSNASP 1265
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 779 PXLP-PXKXPPXP-PPGXPP-XAPSXQPPXXXPPSXXGGPSP 895
P +P P PP P P G PP PS P PS P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +2
Query: 788 PPXKXPPXPPP-GXPP-XAPSXQPPXXXPPSXXGGPSPXHHPGXXP 919
P PP P P G PP PS P PS P P G P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 797 KXPPXPPPGXPPXAPSXQP-PXXXPPSXXGGPSPXHHP 907
K PP PPP P+ P P P GGP P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHP 907
P P PP PPP PP PP+ G S + P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGX---PPXAP--SXQPPXXXPPSXXG-GPSPXHHP 907
P PP P P P PP AP PP PP G GP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPP 871
P P P P PPP P A + PP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPGXXP 919
P P + P P P PP PP PP G P P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = -2
Query: 579 PPPGGXXRXPPPXGRGPGXXPXGXRXXXPXXNRLSPGG----GPXPXXRXKP 436
PPP PPP PG G P +S GG P P +P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +2
Query: 803 PPXPPPGX----PPXAPSXQPPXXXPPSXXGGPSPXHHP 907
PP PPPG PP P P S P+P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 930 PRXLGXXPGWCXGEGPPXXEGGXXXGGCXXGAXGGXPGGGXGGXFXGGRXGXGNXXXGG 754
P+ P G G G GG + GG GG GG G R G GG
Sbjct: 127 PKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 855 GGCXXGAXGGXPGGGXGGXFXGGRXG 778
GG GA GG PGG GG G G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 873 EGGXXXGGCXXGAXGGXPGGGXGGXFXG 790
+ G GG G GG PGG GG G
Sbjct: 610 QAGGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -2
Query: 906 GWCXGEGPPXXEGGXXXGGCXXGAXGGXPG--GGXGGXFXGGRXGXGNXXXG 757
G GEG GG G G G PG GG G F GG G G G
Sbjct: 211 GGFGGEG--HHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 776 NPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPP 871
NP +PP PPP PP P+ + PP
Sbjct: 96 NP-MPPMSQAYRPPPTEPPTVPAYETSSEFPP 126
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPG 243
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 256
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 282
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH-PG 910
P + P PP P PP P P P HH PG
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPP---XXXPPSXXGGP--SPXHHP 907
P PP P P P P PS PP PP+ P SP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPP-PGXPPXAP-SXQPPXXXPPSXXGGPSPXHHPGXXP 919
P P +PP PP P P P S PP PS P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 803 PPXPPPGXPPXAPSXQPP 856
PP PPP P A + PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 773 PNPXLPPXKXPPXPPPGXPPXAP 841
PNP +PP P P PP P
Sbjct: 164 PNPAMPPIPFLPFNPAAQPPFPP 186
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 788 PPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPS 892
P PP PP P +P+ PPS PS
Sbjct: 248 PLTSTPPIPPLSEPKHSPATVNEHISPPSALTNPS 282
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +2
Query: 779 PXLPPXKXPPXPPPGXP--PXAPSXQPPXXXPPSXXGGPSP 895
P LP P P PG P P P + P P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,649,136
Number of Sequences: 5004
Number of extensions: 20372
Number of successful extensions: 311
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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