Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J04
         (931 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            33   0.016
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    32   0.028
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.11 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.81 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   10.0 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 32.7 bits (71), Expect = 0.016
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 770 FPN-PXLPPXKXPPXPPPGXPPXAPSXQPPXXXP 868
           FPN P   P   PP PPP  PP +P    P   P
Sbjct: 573 FPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 29.9 bits (64), Expect = 0.11
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 812 PPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHP 907
           PPP  PP  P   PP        GGP+    P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 29.5 bits (63), Expect = 0.15
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +2

Query: 806 PXPPPGXPPXAPSXQPPXXXPPS-XXGGP 889
           P  P   PP AP   PP   PPS   GGP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGP 602



 Score = 27.1 bits (57), Expect = 0.81
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 818 PGXPPXAPSXQPPXXXPPSXXGGPSP 895
           P   P  P+ QPP   PP    GP P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 27.1 bits (57), Expect = 0.81
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = -2

Query: 579 PPPGGXXRXPPPXGRGPGXXPXGXRXXXPXXNRLSPGGGPXP 454
           PPP      P P   GP   P G R   P  N L  GG   P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSR--PPLPNLLGFGGAAPP 625



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +2

Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
           P  PP   PP P  G P   P+   P        GG +P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624



 Score = 23.4 bits (48), Expect = 10.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 791 PXKXPPXPPPGXPPXAPSXQPPXXXPP 871
           P   PP PPPG    A    PP   PP
Sbjct: 527 PLGPPPPPPPG---GAVLNIPPQFLPP 550


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 31.9 bits (69), Expect = 0.028
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 870 GGXXXGGCXXGAXGGXPGGGXGGXFXGGRXGXGNXXXGGW 751
           G    GG   G  GG  GG   G   GGR G G    GG+
Sbjct: 60  GDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGY 99



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = -2

Query: 870 GGXXXGGCXXGAXGGXPGGGXGGXFXGGRXGXGNXXXGGW 751
           GG   G    G  G    GG GG    GR   G    GG+
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGF 94


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
 Frame = +2

Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQ----------PPXXXPPSXXGGPSPXHHP 907
           P +PP   P   P G  P  PS Q          PP   PP+  GGP P   P
Sbjct: 230 PQMPPGAVPGMQP-GMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISP 281



 Score = 28.3 bits (60), Expect = 0.35
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +2

Query: 803 PPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHP 907
           P  P PG PP     +PP    P   G P+    P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPP 212



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +2

Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSP 895
           PNP +PP      PP    P  P    P    P   GG  P
Sbjct: 181 PNPGMPPGPQMMRPPGNVGP--PRTGTPTQPQPPRPGGMYP 219



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +1

Query: 811 PPPRXPPXGPXPATPXXXXPFXXGWPLPXTP 903
           PP    P  P P  P    P   G P+P  P
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP 230



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = +2

Query: 770 FPNPXLPPXKXPPXPPPG-XPPXAPSXQPPXXXPPSXXGGPSP 895
           +P P   P    P  PPG  P   P  QP    PPS  G   P
Sbjct: 218 YPQPPGVPMPMRPQMPPGAVPGMQPGMQP---RPPSAQGMQRP 257



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = +2

Query: 779 PXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPG 910
           P L P      PPP     AP    P    P    GP     PG
Sbjct: 153 PALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPG 196



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 16/56 (28%), Positives = 19/56 (33%)
 Frame = +3

Query: 525 PPXPGXXAGGXGXXPPGAXXPVPPXXRGPPPXKXXEQXXXKXPXTGXRPPXXXXXP 692
           P  PG         PPGA   + P  +  PP     Q   + P  G  PP     P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPP---SAQGMQRPPMMGQPPPIRPPNP 271



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 822 PGGGXGGXFXGGRXGXGNXXXGGWPP 745
           P GG GG   GGR G         PP
Sbjct: 527 PNGGGGGGGGGGREGSQEWNSRSRPP 552


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.81
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 870 GGXXXGGCXXGAXGGXPGGGXGGXFXGGR 784
           GG   GG    + G  PGGG GG   GGR
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGG---GGR 233



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = +2

Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHH 904
           PN  LPP   P   PP  P      Q P   P    GG S   H
Sbjct: 110 PNHHLPPGASPGLVPP--PQQQQQQQAPLGIPSVAHGGGSGAIH 151



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 855 GGCXXGAXGGXPGGGXGGXFXGGRXGXGNXXXGG 754
           G    G+ GG PGGG G     G  G G    GG
Sbjct: 201 GAGGGGSGGGAPGGGGGS---SGGPGPGGGGGGG 231


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
 Frame = +2

Query: 779 PXLPPX-KXPPXPPPGXPPXAPSXQPPXXXPPSXXGGP 889
           P LPP  K PP PP    P      P    P    G P
Sbjct: 708 PQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAP 745


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = +2

Query: 773 PNPXLPPXKXPPXPPPGXPPXAPSXQPPXXXPPSXXGGPSPXHHPGXXP 919
           PN  +PP      P PG  P  P   PP    P+   GP P    G  P
Sbjct: 74  PNISIPPPTMNMPPRPGMIPGMPG-APPLLMGPN---GPLPPPMMGMRP 118



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 6/34 (17%)
 Frame = +2

Query: 773 PNPXLPPXKXPPXPPP------GXPPXAPSXQPP 856
           PN  LPP      PPP      G PP     +PP
Sbjct: 105 PNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
 Frame = -2

Query: 894 GEGPPXXEGGXXXG-GCXXGAXGGXPGGGXGGXFXG 790
           G   P  EG    G G   G  GG  GGG  G   G
Sbjct: 541 GSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVG 576


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -2

Query: 873  EGGXXXGGCXXGAXGGXPGGGXGGXFXG 790
            + G   GG      GG PGGG      G
Sbjct: 2049 DNGSQHGGGSISGGGGTPGGGKSKGIIG 2076


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,746
Number of Sequences: 2352
Number of extensions: 8276
Number of successful extensions: 81
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)