Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I22
(909 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 38 0.011
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 32 0.74
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 31 1.3
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.3
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 29 3.9
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 3.9
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.9
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 5.2
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 6.9
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 28 9.1
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +1
Query: 667 GALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTX 846
GA P P PP + G P P + P P P P G P
Sbjct: 303 GAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAP---PPPSMGMAPPPVG 359
Query: 847 XXXPPPXXPPPXPXXPXP 900
PPP PPP P P
Sbjct: 360 GAAPPPPPPPPVGGPPPP 377
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 36.3 bits (80), Expect = 0.034
Identities = 25/76 (32%), Positives = 29/76 (38%)
Frame = +1
Query: 658 GXAGALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPM 837
G A P P G S +PP G+ P P G +P P P + P G P
Sbjct: 928 GNAPLPPPPPGGSAPSQPPPPG-GNAPP--PPPPPGGSAPPPGGGAPPLPPPPGGSAPP- 983
Query: 838 STXXXXPPPXXPPPXP 885
PPP PPP P
Sbjct: 984 -----PPPPPPPPPPP 994
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = +1
Query: 667 GALPXPXGASXXDEP-PTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMST 843
G++P P + P P G P +P G +P P P GG P+
Sbjct: 917 GSVPPPPPPPGGNAPLPPPPPGGSAP-SQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP 975
Query: 844 XXXXPPPXXPPPXPXXPXP 900
P PPP P P P
Sbjct: 976 PPGGSAPPPPPPPPPPPPP 994
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 643 VVXRXGXAGALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXG 822
VV G G P P + PP + + TP P + P P P P
Sbjct: 335 VVGTSGGGGVNPPPPPTNNPPSPPPPT--NNTPPPPPPTNKPPPPPPPTNGPPPPPPPTN 392
Query: 823 GXIPMSTXXXXPPPXXPP 876
G P PPP PP
Sbjct: 393 GPPPPPPPTNGPPPPPPP 410
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 32.3 bits (70), Expect = 0.56
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 829 IPMSTXXXXPPPXXPPPXPXXPXP 900
IP+ T PPP PPP P P P
Sbjct: 676 IPIQTMVPPPPPPPPPPPPPPPPP 699
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 829 IPMSTXXXXPPPXXPPPXPXXPXP 900
+P+ PPP PPP P P P
Sbjct: 674 LPIPIQTMVPPPPPPPPPPPPPPP 697
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +1
Query: 688 GASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPX 867
G + P SS P P +A S P P P P + PPP
Sbjct: 304 GETSGPSEPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTP-TTPKTHPQLGPPPP 362
Query: 868 XPPPXPXXP 894
PPP P P
Sbjct: 363 PPPPPPTPP 371
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPX 888
PP GH P H+ P P P + P + M PPP PPP P
Sbjct: 228 PPVGMLGHPPMGAPPPPHS--MPPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPP 285
Query: 889 XPXP 900
P
Sbjct: 286 GGMP 289
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHA-GXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXP 885
PP + P P A G P P P P +P++ PP PPP P
Sbjct: 142 PPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPA--VPLAAASPPPPSGGPPPPP 199
Query: 886 XXPXP 900
P P
Sbjct: 200 PPPPP 204
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 781 PXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXP 894
P VP P P + PPP PPP P P
Sbjct: 172 PAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPP 209
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/76 (30%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +1
Query: 676 PXPXGASXXDEP-PTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXX 852
P P A P P PY P +A P P P P P +
Sbjct: 117 PPPPNAPYPPPPNPPYPPPPNAPYP-PSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYP 175
Query: 853 XPPPXXPPPXPXXPXP 900
PPP PPP P P P
Sbjct: 176 -PPPYPPPPNPPYPPP 190
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXG----GXIPMST 843
P P G+S PP +P A S P P P G G PM T
Sbjct: 2140 PPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGPPPMGAPPSGPPPMGT 2199
Query: 844 XXXXPPPXXPPPXPXXP 894
PP PP P
Sbjct: 2200 PPSGHPPMGAPPMGPPP 2216
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 790 FVPWVXXPXXGGXIPMSTXXXXP-PPXXPPPXPXXPXP 900
FVPW+ +P++ P PP PPP P P
Sbjct: 1561 FVPWIRKYIGSTTLPITPPPPTPSPPQTPPPVNTPPRP 1598
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +1
Query: 658 GXAGALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPM 837
G G L P S +PP R PY + H P+ P G P
Sbjct: 486 GRRGQLQQPYAQSPYQQPPQQQQQSRGPYQQTAQH----PNQQGGRGQAPPPSYGRGGPT 541
Query: 838 STXXXXPPPXXPPP 879
+T PPP P
Sbjct: 542 TTVQQQPPPTGEAP 555
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 820 GGXIPMS--TXXXXPPPXXPPPXPXXPXP 900
GG +P T PPP PPP P P P
Sbjct: 118 GGYVPPPPPTGTLPPPPVTPPPGPETPPP 146
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Frame = +1
Query: 670 ALPXPXGASXXDEP-PTSSXGH-RTPYDEPDXH--AGXSPH--PXXFVPWVXXPXX-GGX 828
A P GAS +P P S + PY E + AG H P P + P GG
Sbjct: 156 AYPGQPGASPQGQPYPGQSYPQGQEPYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGP 215
Query: 829 IPMSTXXXXPPPXXPPPXPXXP 894
PM PP PPP P
Sbjct: 216 PPMGGPPGGYPPPPPPPGAGDP 237
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +1
Query: 742 YDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPP 876
Y++ + G PHP P V P P PPP PP
Sbjct: 233 YNKLEEWTGDKPHPPSVKPSVPIPPPTKPPPRVASRRPPPPLPPP 277
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 754 DXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
D AG + P P P P PPP PPP P P P
Sbjct: 356 DISAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 772 SPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
SP P P P P PPP PPP P P P
Sbjct: 388 SPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 775 PHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
P P P P P PPP PPP P P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 832 PMSTXXXXPPPXXPPPXPXXPXP 900
P S PPP PPP P P P
Sbjct: 1308 PESPPPPPPPPPPPPPPPLPPTP 1330
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/81 (27%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Frame = +1
Query: 682 PXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWV------XXPXXGGXIPMST 843
P GA P + R PY H SP P V P P++
Sbjct: 633 PPGAPIQRVPLPETHHQRVPYSRATHHGEPSPRIPTVTPRVPISPLAESPQKSPLEPVTA 692
Query: 844 XXXXPP--PXXPPPXPXXPXP 900
PP P PPP P P
Sbjct: 693 TQMTPPVAPRVPPPSPRMQPP 713
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 823 GXIPMSTXXXXPPPXXPPPXPXXPXP 900
G P PPP PPP P P P
Sbjct: 461 GQAPPPPPPPPPPPPPPPPPPPPPPP 486
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,315,417
Number of Sequences: 59808
Number of extensions: 330292
Number of successful extensions: 1710
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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