BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I22
(909 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119164-1|AAM51024.1| 192|Drosophila melanogaster RH23514p pro... 31 2.2
AM412919-1|CAL85542.1| 181|Drosophila melanogaster CG16743 prot... 31 2.2
AM412917-1|CAL85540.1| 181|Drosophila melanogaster CG16743 prot... 31 2.2
AE014134-1996|AAF53039.1| 192|Drosophila melanogaster CG16743-P... 31 2.2
AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro... 31 2.9
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 31 2.9
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 31 2.9
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 31 2.9
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 31 2.9
AE014297-1625|AAF54898.1| 460|Drosophila melanogaster CG11670-P... 31 2.9
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 8.8
AY118440-1|AAM48469.1| 499|Drosophila melanogaster RH66493p pro... 29 8.8
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 8.8
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 8.8
AE013599-1412|AAF58562.1| 499|Drosophila melanogaster CG13176-P... 29 8.8
>AY119164-1|AAM51024.1| 192|Drosophila melanogaster RH23514p
protein.
Length = 192
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 739 PYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
PY E + +P ++P+ P GG PPP PPP P P
Sbjct: 60 PYQEMGGYPSYLYNP--YMPYPPYPQMGGYPSYPYNLYMPPPPPPPPHPQQAPP 111
>AM412919-1|CAL85542.1| 181|Drosophila melanogaster CG16743 protein
protein.
Length = 181
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 739 PYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
PY E + +P ++P+ P GG PPP PPP P P
Sbjct: 60 PYQEMGGYPSYLYNP--YMPYPPYPQMGGYPSYPYNPYMPPPPPPPPHPQQAPP 111
>AM412917-1|CAL85540.1| 181|Drosophila melanogaster CG16743 protein
protein.
Length = 181
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 739 PYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
PY E + +P ++P+ P GG PPP PPP P P
Sbjct: 60 PYQEMGGYPSYLYNP--YMPYPPYPQMGGYPSYPYNPYMPPPPPPPPHPQQAPP 111
>AE014134-1996|AAF53039.1| 192|Drosophila melanogaster CG16743-PA
protein.
Length = 192
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 739 PYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
PY E + +P ++P+ P GG PPP PPP P P
Sbjct: 60 PYQEMGGYPSYLYNP--YMPYPPYPQMGGYPSYPYNLYMPPPPPPPPHPQQAPP 111
>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p
protein.
Length = 1272
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P PTS P A SP +P P P S
Sbjct: 264 PRPHPGGGAGPAPTSVIVTAGRKQPPPPPASPSPSRSSSLPPPASPSPSLPPPASPSLSL 323
Query: 856 PPPXXPPPXPXXPXP 900
PPP P P P P P
Sbjct: 324 PPPASPSPSPSPPPP 338
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/75 (24%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P + PP +D P H P P P + P +
Sbjct: 107 PPPPAPPGVESPPGPQPPASPRFDPPPPHT-IEPPPPPAPPTLVPPPPPAPPTIKPPPPP 165
Query: 856 PPPXXPPPXPXXPXP 900
PP PP P P P
Sbjct: 166 APPTVEPPPPPPPAP 180
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P PTS P A SP +P P P S
Sbjct: 2531 PRPHPGGGAGPAPTSVIVTAGRKQPPPPPASPSPSRSSSLPPPASPSPSLPPPASPSLSL 2590
Query: 856 PPPXXPPPXPXXPXP 900
PPP P P P P P
Sbjct: 2591 PPPASPSPSPSPPPP 2605
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/75 (24%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P + PP +D P H P P P + P +
Sbjct: 370 PPPPAPPGVESPPGPQPPASPRFDPPPPHT-IEPPPPPAPPTLVPPPPPAPPTIKPPPPP 428
Query: 856 PPPXXPPPXPXXPXP 900
PP PP P P P
Sbjct: 429 APPTVEPPPPPPPAP 443
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/75 (24%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P + PP +D P H P P P + P +
Sbjct: 370 PPPPAPPGVESPPGPQPPASPRFDPPPPHT-IEPPPPPAPPTLVPPPPPAPPTIKPPPPP 428
Query: 856 PPPXXPPPXPXXPXP 900
PP PP P P P
Sbjct: 429 APPTVEPPPPPPPAP 443
>AE014297-1625|AAF54898.1| 460|Drosophila melanogaster CG11670-PA
protein.
Length = 460
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = +1
Query: 739 PYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
P P+ + +P+P V P P S PPP PPP P P P
Sbjct: 30 PAQYPEPYRNPNPNP------VPDPTRPPPPPPSPPCGRPPPGSPPPGPPPPGP 77
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein
heavy chian protein.
Length = 4639
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 134 TTPALLSKSISHICGYAKFPTNV 202
TTP LL K+ H C Y K P V
Sbjct: 2611 TTPELLLKTFDHYCEYRKTPNGV 2633
>AY118440-1|AAM48469.1| 499|Drosophila melanogaster RH66493p
protein.
Length = 499
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 823 GXIPMSTXXXXPPPXXPPPXPXXPXP 900
G P PPP PPP P P P
Sbjct: 325 GQCPSPVTAAPPPPPPPPPPPPPPPP 350
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 134 TTPALLSKSISHICGYAKFPTNV 202
TTP LL K+ H C Y K P V
Sbjct: 2611 TTPELLLKTFDHYCEYRKTPNGV 2633
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 134 TTPALLSKSISHICGYAKFPTNV 202
TTP LL K+ H C Y K P V
Sbjct: 2611 TTPELLLKTFDHYCEYRKTPNGV 2633
>AE013599-1412|AAF58562.1| 499|Drosophila melanogaster CG13176-PA
protein.
Length = 499
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 823 GXIPMSTXXXXPPPXXPPPXPXXPXP 900
G P PPP PPP P P P
Sbjct: 325 GQCPSPVTAAPPPPPPPPPPPPPPPP 350
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,756,460
Number of Sequences: 53049
Number of extensions: 530957
Number of successful extensions: 4824
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3966
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -