Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I22
(909 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 33 0.20
At5g20100.1 68418.m02393 expressed protein predicted proteins, A... 31 0.80
At5g10060.1 68418.m01165 expressed protein 31 1.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 31 1.1
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 30 1.8
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 30 2.4
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 3.2
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 3.2
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 3.2
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 29 4.3
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 5.6
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 29 5.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 5.6
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 5.6
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 7.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 7.4
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 9.8
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 9.8
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 28 9.8
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 28 9.8
At1g61750.1 68414.m06964 expressed protein contains Pfam profile... 28 9.8
At1g29380.1 68414.m03592 hypothetical protein 28 9.8
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Frame = +1
Query: 667 GALPXPX--GASXXDEPPTSSXG--HRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIP 834
G+ P P G + PP + G H PY P + P P P GG P
Sbjct: 269 GSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYGGAPP 328
Query: 835 MSTXXXXPPP---XXPPP 879
+ PPP PPP
Sbjct: 329 ANNMGGAPPPNYGGGPPP 346
>At5g20100.1 68418.m02393 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 113
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 563 GCGAGARMASKYPAARPPSPEYSXV 637
GCG G R+ PA PPSP+ S V
Sbjct: 62 GCGHGGRLGELSPALDPPSPKISAV 86
>At5g10060.1 68418.m01165 expressed protein
Length = 469
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHAGXSPHPXXFV--PWVXXPXXGGXIPMSTXXXXPPPXXPPP 879
P ++ ++TP + H +P P F+ P + P G IP+ PPP PPP
Sbjct: 374 PSYNNSQNQTPTTQGQYHVIPNPPPPQFLKPPVMNNPYAFGNIPLMPPGLPPPP--PPP 430
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/79 (26%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPH--PXXFVPWVXXPXXGGXI--PMST 843
P P S P P+ P H+ PH P P++ P + P T
Sbjct: 545 PPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPT 604
Query: 844 XXXXPPPXXPPPXPXXPXP 900
PPP P P P P
Sbjct: 605 PVYSPPPPPPCIEPPPPPP 623
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/77 (23%), Positives = 24/77 (31%)
Frame = +1
Query: 670 ALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXX 849
+LP P + P + P P ++ P P + P P
Sbjct: 406 SLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYS 465
Query: 850 XXPPPXXPPPXPXXPXP 900
PPP PPP P P
Sbjct: 466 PPPPPPPPPPPPPVYSP 482
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P +PPT H P +P H P P P P P
Sbjct: 83 PKPPTVKPHPKPPTVKPPHPKPPTKPHPH----PKPPIVKPPTKPPPSTPKPPTKPPPST 138
Query: 856 PPPXXPPPXPXXPXP 900
P P P P P P
Sbjct: 139 PKPPTTKPPPSTPKP 153
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +1
Query: 736 TPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
+P EP+ P P P P P + PPP PP P P P
Sbjct: 49 SPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPP 103
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 823 GXIPMSTXXXXPPPXXPPPXPXXPXP 900
G P S PPP PPP P P P
Sbjct: 373 GCSPPSPPPPPPPPPPPPPPPPPPPP 398
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 673 LPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXX 852
+P P +S PP SS + + P+ + +P+P VP P S+
Sbjct: 128 VPNPPESSSNPNPPDSSSNPNSNPNPPE--SSSNPNPPVTVPNPPESSSNPNPPESSSNP 185
Query: 853 XPPPXXP-PPXPXXPXP 900
PP P PP P P
Sbjct: 186 NPPITIPYPPESSSPNP 202
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +1
Query: 673 LPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXX 852
+P P +S PP SS P P SP+P VP P G P
Sbjct: 166 VPNPPESSSNPNPPESSSNPNPPITIPYPPESSSPNPPEIVP---SPPESGYTP--GPVL 220
Query: 853 XPPPXXPPP 879
PP P P
Sbjct: 221 GPPYSEPGP 229
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 832 PMSTXXXXPPPXXPPPXPXXPXP 900
P S PPP PPP P P P
Sbjct: 105 PASAPTVSPPPVSPPPAPTSPPP 127
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 832 PMSTXXXXPPPXXPPPXPXXPXP 900
P S PPP PPP P P P
Sbjct: 39 PQSPPPPPPPPPPPPPPPPPPPP 61
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 832 PMSTXXXXPPPXXPPPXPXXPXP 900
P+ PPP PPP P P P
Sbjct: 36 PLFPQSPPPPPPPPPPPPPPPPP 58
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +1
Query: 664 AGALPXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMST 843
A A P P S P S+ + P P HA +P P P P P S+
Sbjct: 44 ASASPFPFPNS---SPAPSTFIYPPPTPSPYTHAPHAPSPFNHAPPDSYPFTHAP-PASS 99
Query: 844 XXXXPPPXXPPP 879
PP PPP
Sbjct: 100 PFNHAPPGPPPP 111
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPX 888
PP + PY +P P P P+ P P T PPP PP P
Sbjct: 99 PPPTVKPPPPPYVKPPPPPTVKPPPPP-TPYTPPPPTPYTPPPPTVKPPPPPVVTPP-PP 156
Query: 889 XPXP 900
P P
Sbjct: 157 TPTP 160
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 751 PDXHAGXSPHPXXFVPWVXXPXXGGXIPMS-TXXXXPPPXXPPPXP 885
P+ SPHP +P V P P S PPP PPP P
Sbjct: 22 PNSSTNPSPHP---LPPVTPPSSFFFFPQSGDLRRPPPPPTPPPSP 64
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 706 EPPTSSXGHRTPYDE-PDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPX 882
+PP S PYD+ P P P P P P PPP PP
Sbjct: 470 QPPKESPQPNDPYDQSPVKFRRSPPPPPVHSPPPPSPIHSPPPPPVYSPPPPPPVYSPPP 529
Query: 883 P 885
P
Sbjct: 530 P 530
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 682 PXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPP 861
P S PP S P P + P +P V P P ST PP
Sbjct: 62 PPTVSSPPPPPLDSSPPPPPDLTPPPSSPPPPDAPPPIPIVFPPPIDSPPPESTNSPPPP 121
Query: 862 PXXPPPXP 885
PP P
Sbjct: 122 EVFEPPPP 129
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +1
Query: 676 PXPXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXX 855
P P AS PT++ P P G +P P P P P +T
Sbjct: 116 PPPPDASPSPPAPTTTNPPPKPSPSPP---GETPSPPGETPSPPKPSPSTPTPTTTTSPP 172
Query: 856 PPPXXPPPXP 885
PPP P
Sbjct: 173 PPPATSASPP 182
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 832 PMSTXXXXPPPXXPPPXPXXPXP 900
P ST PPP PPP P P
Sbjct: 706 PSSTRLGAPPPPPPPPLSKTPAP 728
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = +1
Query: 682 PXGASXXDEPPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPP 861
P S D+ P P P H+ + P P P P+ PP
Sbjct: 674 PPPISNSDKKPALPRPPPPPPPPPMQHSTVTKVPPPPPPAPPAPPT----PIVHTSSPPP 729
Query: 862 PXXPPPXPXXPXP 900
P PPP P P P
Sbjct: 730 PPPPPPPPAPPTP 742
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 781 PXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPXXPXP 900
P VP V P +P T PPP P P P P
Sbjct: 74 PPAPVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTP 113
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHAGXSPHPXXF-VPWVXXPXXGGXIPMSTXXXXPPPXXPPPXP 885
PP+ S R P P P P F +P P +P PPP PP P
Sbjct: 46 PPSPSSPPRLPPPFPALFPPEPPLPPRFELPPPLFPPP--PLPRLPPPLLPPPEEPPREP 103
Query: 886 XXPXP 900
P P
Sbjct: 104 PPPPP 108
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +1
Query: 709 PPTSSXGHRTPYDEPDXHAGXSPHPXXFVPWVXXPXXGGXIPMSTXXXXPPPXXPPPXPX 888
PPT + + P P H +P + P + P P+ + PPP PP P
Sbjct: 158 PPTPT--YSPPIKPPPVHKPPTP---TYSPPIKPPVHKPPTPIYSPPIKPPPVHKPPTPI 212
Query: 889 XPXP 900
P
Sbjct: 213 YSPP 216
>At1g61750.1 68414.m06964 expressed protein contains Pfam profile:
PF01657 domain of unknown function
Length = 352
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 856 PPPXXPPPXPXXPXPXXL 909
PPP PPP P P P L
Sbjct: 247 PPPPPPPPPPPPPPPQRL 264
>At1g29380.1 68414.m03592 hypothetical protein
Length = 228
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 899 GXGXXGXGGGXXGGGXXXXVDMGIXPPXXGXXTXGTXSXGWG 774
G G G GGG GGG D G G G G G
Sbjct: 101 GGGGGGYGGGTPGGGGGGGGDTGAGAGGGGYGGGGDTGAGGG 142
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,412,128
Number of Sequences: 28952
Number of extensions: 240503
Number of successful extensions: 2005
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -