Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I21
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   4.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   4.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   4.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.6  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/34 (29%), Positives = 12/34 (35%)
 Frame = +1

Query: 682 PAPTXXPPLXTLSXPPXPXPPPXPPEXPTXRAKP 783
           P+P    P+        P  PP P   P  R  P
Sbjct: 78  PSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 19/73 (26%), Positives = 24/73 (32%)
 Frame = +1

Query: 565 YTPQSXGXXPXLPXRPWRAXALVSSXAXTXTSTXFP*XPPAPTXXPPLXTLSXPPXPXPP 744
           Y+       P  P  P    A V     T T+       P P   P   +LS PP    P
Sbjct: 229 YSQYGSWFLPHQPIYP-AVTATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNP 287

Query: 745 PXPPEXPTXRAKP 783
           P   +  T  + P
Sbjct: 288 PDHIQQATPYSAP 300


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 724 PPXPXPPPXPPEXPTXRAKP 783
           PP P P P P    T  ++P
Sbjct: 392 PPEPVPTPEPQPTQTTESEP 411


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 700 PPLXTLSXPPXPXPPPXPP 756
           PPL  +  PP P PP  PP
Sbjct: 175 PPLPQV--PPLPLPPIFPP 191


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 302 AELGSTTSPSFTLIDDTVPACDDLN 228
           A LG+T+S +F  +++  P C+  N
Sbjct: 241 ATLGTTSSCTFDNLEELGPVCNSNN 265


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 208 RPLNLCIKIILGLVL 164
           RP+NL ++IIL ++L
Sbjct: 54  RPINLLVQIILDVIL 68


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 208 RPLNLCIKIILGLVL 164
           RP+NL ++IIL ++L
Sbjct: 54  RPINLLVQIILDVIL 68


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 208 RPLNLCIKIILGLVL 164
           RP+NL ++IIL ++L
Sbjct: 374 RPINLLVQIILDVIL 388


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/44 (27%), Positives = 15/44 (34%)
 Frame = +1

Query: 634 SSXAXTXTSTXFP*XPPAPTXXPPLXTLSXPPXPXPPPXPPEXP 765
           +S A    S   P    +P        +  PP P P   PP  P
Sbjct: 706 TSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/44 (27%), Positives = 15/44 (34%)
 Frame = +1

Query: 634 SSXAXTXTSTXFP*XPPAPTXXPPLXTLSXPPXPXPPPXPPEXP 765
           +S A    S   P    +P        +  PP P P   PP  P
Sbjct: 598 TSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 641


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,397
Number of Sequences: 336
Number of extensions: 2781
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)