Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I21
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    40   8e-05
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.26 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.8  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   2.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 40.3 bits (90), Expect = 8e-05
 Identities = 31/92 (33%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
 Frame = +2

Query: 560 DPIPPNLKGV--FPXXLRGPG--GPXRWCHXXLXPXPPRRFXXLPXPPPXTLPXXPFXXP 727
           DP  PN  G+   P  +R PG  GP R       P PPR     P PP   +P  P   P
Sbjct: 177 DPARPN-PGMPPGPQMMRPPGNVGPPR-TGTPTQPQPPRPGGMYPQPPGVPMPMRP-QMP 233

Query: 728 PXLXXLPXPXSXPXPXQNQXLSXPPXXXXPXP 823
           P       P   P P   Q +  PP    P P
Sbjct: 234 PGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPP 265



 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/58 (24%), Positives = 16/58 (27%)
 Frame = +2

Query: 656 PPRRFXXLPXPPPXTLPXXPFXXPPXLXXLPXPXSXPXPXQNQXLSXPPXXXXPXPPL 829
           P  RF   P      +P  P   PP    LP     P          P       PP+
Sbjct: 110 PTTRFAPEPRAEVKFVPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISHRPPPI 167


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 22/85 (25%), Positives = 24/85 (28%)
 Frame = +2

Query: 650 PXPPRRFXXLPXPPPXTLPXXPFXXPPXLXXLPXPXSXPXPXQNQXLSXPPXXXXPXPPL 829
           P PP     L  PP    P       P     P     P    N   + PP    P PP+
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPM 591

Query: 830 XLXXXXPPPXHXXTXXAPLRXRPHL 904
                 P P        P   RP L
Sbjct: 592 ---GPPPSPLAGGPLGGPAGSRPPL 613


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 679 PPAPTXXPPLXTLSXPPXPXPPPXPPEXP 765
           PP P    P  T++ PP P   P  P  P
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMPGAP 99


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 63  ISRSRWPDKTIPYFCSIRKACETRKVEXKTRYCGNTRPSIIFIQR 197
           I RS     TIPY  + R    T   +   R+CG   PS + + +
Sbjct: 558 IRRSANSSVTIPYERTFRNVANTNIGDANFRFCGCGWPSHMLVPK 602


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 634 SSXAXTXTSTXFP*XPPAPTXXPPLXTLSXPPXPXPPPXPPEXPTXRAKPXSL 792
           SS A +  ST  P    +P+       +  PP P PPP     P    +P  L
Sbjct: 757 SSTASSSVSTGMP----SPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVL 805


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 214 EELKXFKSSHAGTVSSIKVKEGDVVXPSSAVADLEXCRHPTV 339
           E L  F+S+ A    +   KEGD    ++    ++ C+HP +
Sbjct: 30  ENLWKFESTAAPESLTETWKEGDAKARATIALLVDDCQHPLI 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,734
Number of Sequences: 2352
Number of extensions: 11494
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)