Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I18
(918 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 148 2e-34
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 144 4e-33
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 136 1e-30
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 130 4e-29
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 81 3e-14
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 79 2e-13
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 77 5e-13
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 72 2e-11
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 64 6e-09
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 61 4e-08
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 59 2e-07
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 58 4e-07
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 57 7e-07
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 56 1e-06
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 55 3e-06
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 51 5e-05
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 48 3e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 48 4e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 47 8e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 47 8e-04
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 44 0.004
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.017
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 39 0.21
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 38 0.47
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 36 1.4
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 35 3.3
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 34 5.9
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 33 7.7
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 148 bits (358), Expect = 2e-34
Identities = 65/83 (78%), Positives = 69/83 (83%)
Frame = +2
Query: 80 PLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCST 259
PLA LLHPSP + K KRLV PNSYFMDVKCPGCYK TTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 260 ILCQPTGGRARLTEGCSFRRKQH 328
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 144 bits (348), Expect = 4e-33
Identities = 64/83 (77%), Positives = 68/83 (81%)
Frame = +2
Query: 80 PLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCST 259
PLA LLHPS + K KRLV PNSYFMDVKCPGCYK TTVFSHAQ VV+C GCST
Sbjct: 2 PLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 260 ILCQPTGGRARLTEGCSFRRKQH 328
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 136 bits (328), Expect = 1e-30
Identities = 59/80 (73%), Positives = 67/80 (83%)
Frame = +2
Query: 83 LAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTI 262
LA+ LL+PSPAS KLK LVP P S+FMDVKCPGC+ TTVFSHAQ VV+C GC+T+
Sbjct: 3 LAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTV 62
Query: 263 LCQPTGGRARLTEGCSFRRK 322
LCQPTGG+ARLTEGCSFRRK
Sbjct: 63 LCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 130 bits (315), Expect = 4e-29
Identities = 58/81 (71%), Positives = 62/81 (76%)
Frame = +2
Query: 80 PLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCST 259
PLA LHPSPA + KLKRLV PNSYFMDVKCPGCY T+FSHAQ V C GC T
Sbjct: 1981 PLAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGCRT 2040
Query: 260 ILCQPTGGRARLTEGCSFRRK 322
ILC PTGG+ARLTEGCSFR+K
Sbjct: 2041 ILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 81.4 bits (192), Expect = 3e-14
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 134 KLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARLTEGCSF 313
K KR++P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+ARL +GC F
Sbjct: 19 KKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLIKGCKF 78
Query: 314 RR 319
R
Sbjct: 79 SR 80
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 79.0 bits (186), Expect = 2e-13
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = +2
Query: 80 PLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCST 259
PL LLHPSP R K K LV PNSYFMD+KCPGCYK TTVFSHAQ VV+ A T
Sbjct: 2 PLVKDLLHPSPEKKRKHKK-KHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--QT 58
Query: 260 ILC 268
+ C
Sbjct: 59 LRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 77.4 bits (182), Expect = 5e-13
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 89 IXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILC 268
+ LL+P P + KLKRLV PNSYF+++KC GC V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 269 QPTGGRARLT 298
PTGG+ T
Sbjct: 63 IPTGGKCAFT 72
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/78 (42%), Positives = 41/78 (52%)
Frame = +2
Query: 83 LAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTI 262
L + +LHPS K K LVP+P S F+ ++CP C TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 263 LCQPTGGRARLTEGCSFR 316
L PTGGR L + R
Sbjct: 64 LATPTGGRILLADQVEIR 81
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 63.7 bits (148), Expect = 6e-09
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +2
Query: 134 KLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPT 277
K K LV P+SYFMDVK GCYK +FS VV+ GCST+ CQPT
Sbjct: 207 KKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 89 IXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILC 268
+ L +PS + KLKRL+ PNS+++ KC C K +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 269 QPTGGR 286
+P+GG+
Sbjct: 68 RPSGGK 73
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +2
Query: 83 LAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTI 262
+A L P+ K RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 263 LCQPTGGRARLTEGCSFRR 319
+ +GGRA ++ C F++
Sbjct: 61 ILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = +2
Query: 80 PLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPG 193
PLA LLHPSP + K KRLV PNSYFMDVKCPG
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +2
Query: 26 RAFLKLCFSRLCIKAVTXPLAIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKX 205
R L + LC + T L L + + K +RLV PNSYFMDV+CPG Y+
Sbjct: 151 RVLLCAPLNTLCTEH-TMKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEI 209
Query: 206 TTVFSHAQXVVV 241
TTVFS AQ VV+
Sbjct: 210 TTVFSRAQTVVL 221
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 140 KRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
K L+P P S F+ +CP C FSHA VV C C +L PTGG+A+L
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 54.8 bits (126), Expect = 3e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 140 KRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
K L+P P S F+ V CP C VFSH+ C C +L +PTGG+AR+
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 50.8 bits (116), Expect = 5e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +2
Query: 95 LLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVV 241
LL+P + K KRL+ PNSYFMDVKC C +FS+AQ ++
Sbjct: 5 LLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 37.9 bits (84), Expect = 0.36
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 251 CSTILCQPTGGRARLTEGCSFRRK 322
CS ILC+PTGG+ ++ GC+F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 149 VPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
VP P S F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 170 FMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 46.8 bits (106), Expect = 8e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 140 KRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGR 286
K ++P P S F+ VKC C VFSH V C C L +PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 46.8 bits (106), Expect = 8e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 146 LVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
LVP P S F+ V+C C +F +A V C C L +PTGG+A++
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 149 VPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARL 295
+P P+S F V C C + V+SHA V C C + + TG +A++
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 42.3 bits (95), Expect = 0.017
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 170 FMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRA 289
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 38.7 bits (86), Expect = 0.21
Identities = 26/75 (34%), Positives = 32/75 (42%)
Frame = +2
Query: 104 PSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGG 283
P P R K KRLV + Y MDVKC GC K V+ VV C C + P G
Sbjct: 8 PHPLQRRSGNK-KRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPACRLL---PDRG 61
Query: 284 RARLTEGCSFRRKQH 328
+ + +QH
Sbjct: 62 TSEAYRKMLLQTEQH 76
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 37.5 bits (83), Expect = 0.47
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 161 NSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGG 283
N +F+ +KC C VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 195 QPGHLTSMK*ELGCGTSRLSLXXXRXDAGEGCNK 94
QPGHLTS K +LG T+ +L +A GCNK
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNK 37
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 34.7 bits (76), Expect = 3.3
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 265 KDR*ASSADHHXLCVTKNCCXLVTARALNIHEI 167
+DR S ++ LC+T++ C LV RAL++H++
Sbjct: 22 QDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 33.9 bits (74), Expect = 5.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 98 LHPSPASXRXXXKLKRLVPHPNSYFMD 178
LHP P + K KRLV PNSYF++
Sbjct: 13 LHPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 161 NSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILCQPTGGRARLTEG 304
N++ + CP C + + +V CAGC I+ QP G +R + G
Sbjct: 239 NNFVIKGNCPACRRQ--FIGYKNQIVRCAGCGNIVWQPKGDVSRGSRG 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,557,784
Number of Sequences: 1657284
Number of extensions: 7185218
Number of successful extensions: 10891
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10890
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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