Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I18
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0487 + 16471538-16471540,16471694-16471795,16471880-164719...   120   2e-27
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460...    47   2e-05
04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590     46   6e-05
04_04_0303 + 24269467-24270741                                         29   5.2  

>04_03_0487 +
           16471538-16471540,16471694-16471795,16471880-16471908,
           16472619-16472745
          Length = 86

 Score =  120 bits (289), Expect = 2e-27
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +2

Query: 89  IXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTILC 268
           I LL+P     +   K KRLV  PNS+FMDVKC GC+  TTVFSH+Q VVVC GC T+LC
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLC 66

Query: 269 QPTGGRARLTEGCSFRRK 322
           QPTGG+ARLTEGCSFRRK
Sbjct: 67  QPTGGKARLTEGCSFRRK 84


>02_03_0220 +
           16545571-16545573,16545717-16545818,16545980-16546008,
           16549421-16553036
          Length = 1249

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 22/46 (47%), Positives = 27/46 (58%)
 Frame = +2

Query: 89  IXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHA 226
           I LL+P     +   K KRLV  PNS+FMDVKC GC+  +  F  A
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNMSVRFDIA 52


>04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590
          Length = 45

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +2

Query: 89  IXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCY 199
           I LL+P     +   K KRLV  PNS+FMDVKC GC+
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCF 43


>04_04_0303 + 24269467-24270741
          Length = 424

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +2

Query: 86  AIXLLHPSPASXRXXXKLKRLVPHPNSYFMDVKCPGCYKXTTVFSHAQXVVVCAGCSTIL 265
           A+ LLHP          L  ++PH  S  +D  CP  Y+   + S A+ V     C+++ 
Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYR---IRSLARVV-----CASVS 197

Query: 266 CQPTGGRA 289
           C  TG  A
Sbjct: 198 CSATGAGA 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,968,367
Number of Sequences: 37544
Number of extensions: 215503
Number of successful extensions: 320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)