Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I17
         (893 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26584| Best HMM Match : Peptidase_M3 (HMM E-Value=0)                31   1.7  
SB_22844| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.1  

>SB_26584| Best HMM Match : Peptidase_M3 (HMM E-Value=0)
          Length = 851

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 594 IFKKVQLRTKTKKNIKIRNWR-RYYTITHKNEALKINKL 481
           I + ++     KK IKI  W  +YYT   K +ALK+N L
Sbjct: 256 ILESIKKMESGKKQIKIMPWDFQYYTGLAKTQALKLNSL 294


>SB_22844| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 251

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 211 PRPMVARSRADRVIIFSRFACCEYVSLN 128
           PRP+V  + AD V++  RFA   Y S+N
Sbjct: 190 PRPLVEVTEADLVLVAERFADKRYDSIN 217


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,834,974
Number of Sequences: 59808
Number of extensions: 399030
Number of successful extensions: 860
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)