Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I17
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    32   0.48 
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +2

Query: 47  LFIREDQRVSYI---IWIGHNENDTSCPVRVKTHIFAASEP*EDDDTVRSTPSHHRSRPV 217
           L +R D+R+  +   I I H E+D   PV++   ++ A++  E D  +R   S +     
Sbjct: 257 LTMRSDKRIRLVSCPIIILHAEDDKILPVKLGRALYEAAKDAERDIKIREFSSDYGLGHK 316

Query: 218 HV*RTPDDPQPV*TRLGQTSTPTT 289
            + R P+ P+ +   +G  + P+T
Sbjct: 317 FICRYPELPEIIEEFVGSVTPPST 340


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 347  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 207
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 347  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 207
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 347  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 207
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 347  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 207
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,421,997
Number of Sequences: 27780
Number of extensions: 313598
Number of successful extensions: 724
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)