Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I16
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 37 0.022
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 31 0.82
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.9
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 30 1.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.9
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 30 1.9
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 29 3.3
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 3.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 3.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 4.4
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 29 5.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 5.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 5.8
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 7.7
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 195 YPYNPYYGNVDSLSYGSGDSNR--GGLVMSRYYNPYYN-PRAVGGGMAAFMYRQPEA 356
Y N YYGN YG+G N+ GG + YYN YYN GG + Y Q ++
Sbjct: 138 YYGNGYYGNGYGNGYGNGYYNQYNGGYGGNGYYNQYYNGNNYYGGNRGYYNYNQGQS 194
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.27
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Frame = +3
Query: 162 VMMXCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNPYY-NPRAVGG--GMAA 332
+++ C +L AYPY+ YGN D Y Y Y NP GG G
Sbjct: 7 LVVSCGILAAAYPYSQQYGNYDQ-QYSQQSQYYPSSGQQGYRGGYQSNPGMQGGYQGNGQ 65
Query: 333 FMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSP 491
Y+ + Q GQ R Q Y Q ++ YP++ ++ ++SP
Sbjct: 66 DSYQDFQGYQGYQRGQG--GQRGYQ-----GYQSNQRSQGSYPERYDSSMYSP 111
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.47
Identities = 27/115 (23%), Positives = 37/115 (32%), Gaps = 2/115 (1%)
Frame = +1
Query: 202 TIPTMETWTPFPTARATVTEEAWS*AVTIILT--TTPELWAVAWPRSCTASPKPHRRLQR 375
T+PT T TP T T T + T T TT P + T +
Sbjct: 215 TVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTT 274
Query: 376 ARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKRPSWLTPLKRSNCT 540
T P T + K+ + T +T S+ + TP S CT
Sbjct: 275 TPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKCT 329
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 294 YYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE 473
Y NP+A G + +Q + P Y P R++Q +Y P+Q+ + Y QQ +
Sbjct: 27 YQNPQAGYG----YNNQQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQ 82
Query: 474 N 476
N
Sbjct: 83 N 83
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 175 ARYWCKRIPTIPTMETWTPFPTARATVT 258
A Y CK +P + T TW P P +AT T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 300 CSKDYSNGS*PSLLGYCRPSRRKGSPRFHSRDCRDTLAP 184
CSK Y GS +GYCRP +GS + S C D P
Sbjct: 455 CSKGYGKGS----IGYCRPCCPEGSTK--SWQCEDCSKP 487
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 175 ARYWCKRIPTIPTMETWTPFPTARATVT 258
A Y CK +P + T TW P P +AT T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 300 CSKDYSNGS*PSLLGYCRPSRRKGSPRFHSRDCRDTLAP 184
CSK Y GS +GYCRP +GS + S C D P
Sbjct: 827 CSKGYGKGS----IGYCRPCCPEGSTK--SWQCEDCSKP 859
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 PTARATVTEEAWS*AVTIILTTTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPL 414
PT T + + S T+ +TT + PR+ ++S A TY V L
Sbjct: 39 PTCEKTSSNQPMS---TVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAAL 95
Query: 415 PIPATYRNKKTK---SITLSNQRTRSSAPLKRP 504
+P T ++ K + S + N + + + LKRP
Sbjct: 96 VVPTTLQSPKREFVCSTPIKNGTSDAKSHLKRP 128
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 PTARATVTEEAWS*AVTIILTTTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPL 414
PT T + + S T+ +TT + PR+ ++S A TY V L
Sbjct: 39 PTCEKTSSNQPMS---TVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAAL 95
Query: 415 PIPATYRNKKTK---SITLSNQRTRSSAPLKRP 504
+P T ++ K + S + N + + + LKRP
Sbjct: 96 VVPTTLQSPKREFVCSTPIKNGTSDAKSHLKRP 128
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 202 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 360
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 216 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 273
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 202 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 360
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 212 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 269
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 202 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 360
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 155 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 212
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 298 TTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNK 441
TTPE + PRS + +P +RL T AA PIP K
Sbjct: 63 TTPEAPTTSEPRSHSRDARPTQRLPLTWSTVTPTAAPSQPIPTATSRK 110
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 159 FVMMXCALLVQAYPYNPYYGNVDSLSYGS 245
F M A YPY+PYY L +GS
Sbjct: 311 FAMNQKASFANQYPYHPYYHQYSQLDHGS 339
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 282 YYNPYYN--PRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVY 455
YY PYY P A G + +Q +A A ++ Q A + QQ+ + Y
Sbjct: 25 YYTPYYYYYPTAAVAGTTG-VAQQTQAGGASQQAYAQQQPQQNQQYAQGT---QQQQQQY 80
Query: 456 YPQQPE 473
YPQQ +
Sbjct: 81 YPQQTQ 86
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 288 NPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYY--P 461
NP NP + G+ P Q P V P R + + V Q + V P
Sbjct: 63 NPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPP-GNLNPVQQPQIPVQRTPP 121
Query: 462 QQPENPIFSPTQATELA 512
Q P P+ P Q T++A
Sbjct: 122 QCPPPPVPHPPQITQMA 138
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 426 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKVE 533
YVPQ+ P PE +P+Q + +PT +E
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 432 PQQENEVYYPQQPENPIFSPTQATELA 512
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,858,165
Number of Sequences: 27780
Number of extensions: 376635
Number of successful extensions: 1191
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -