Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I15
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         29   3.6  
03_01_0515 - 3864796-3865425                                           28   8.2  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/61 (29%), Positives = 19/61 (31%)
 Frame = +3

Query: 666 PPPXTXXIXTAVXXXTTLSTXXXXPSSLPXPPXXXPX*XCPSXSHXPXXXPXPCXXPPXP 845
           PPP    +   V            P S P PP   P    P     P   P P   PP P
Sbjct: 163 PPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQ-PKPQPPPTLPPPSP 221

Query: 846 P 848
           P
Sbjct: 222 P 222


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 25/97 (25%), Positives = 30/97 (30%)
 Frame = +3

Query: 546 PEXSXXPVAEPTEXXPTNVXREEXEFXTXSTCGTLXSXWXPPPXTXXIXTAVXXXTTLST 725
           PE    P + PTE  P  +        T S          PPP      T+      L  
Sbjct: 33  PEAEASPPSPPTEASPPPLAPPPS--VTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPP 90

Query: 726 XXXXPSSLPXPPXXXPX*XCPSXSHXPXXXPXPCXXP 836
               P++ P PP   P    P  S  P   P P   P
Sbjct: 91  PPPPPAASPPPPPPSPPPPSPVKSSPP---PPPAWSP 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,147
Number of Sequences: 37544
Number of extensions: 183073
Number of successful extensions: 402
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)