Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I15
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (gr...    30   2.4  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    29   3.2  

>U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (grd
           related) protein 6 protein.
          Length = 240

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +3

Query: 738 PSSLPXPPXXXPX*XCPSXSHXPXXXPXPCXXPPXPP 848
           P  +  PP   P   CP     P   P P   PP PP
Sbjct: 50  PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +3

Query: 741 SSLPXPPXXXPX*XC-PSXSHXPXXXPXPCXXPPXPP 848
           SS+P PP   P   C P+  H     P     PP PP
Sbjct: 762 SSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +3

Query: 741 SSLPXPPXXXPX*XC-PSXSHXPXXXPXPCXXPPXPP 848
           SS+P PP   P   C P+  H     P     PP PP
Sbjct: 762 SSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,990,968
Number of Sequences: 27780
Number of extensions: 123311
Number of successful extensions: 168
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)