Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I14
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +2

Query: 104 SLXTLVXFHXWQEXRXRTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQ 271
           +L TLV    W E       M     ++   + +++E  +  GF    L + +P Q
Sbjct: 91  NLKTLVAIGGWNEGSVNYSKMAASSSLRAVFIKSVVEFVKTWGFDGFDLDWEYPGQ 146


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/54 (20%), Positives = 23/54 (42%)
 Frame = +2

Query: 104 SLXTLVXFHXWQEXRXRTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWP 265
           +L T++    W         +     ++  L+ +  E FEK GF  + + + +P
Sbjct: 95  NLKTIISIGGWNAGNAILAPIAASPELRANLIASSFEYFEKYGFNGLDIDWEYP 148


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 379 KALPYHRDHRS*THVLY 329
           K +P H D R  THV+Y
Sbjct: 655 KFVPEHIDQRLCTHVVY 671


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,456
Number of Sequences: 336
Number of extensions: 2893
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)