Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I14
(910 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43840| Best HMM Match : NDK (HMM E-Value=0) 207 8e-54
SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 30 2.2
SB_43132| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32) 28 9.1
>SB_43840| Best HMM Match : NDK (HMM E-Value=0)
Length = 786
Score = 207 bits (506), Expect = 8e-54
Identities = 94/147 (63%), Positives = 110/147 (74%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RTF+M+KPD V RGL+G II RFEKKGFKLV +KFV S++ ++HY LA F+ GL
Sbjct: 640 RTFLMIKPDAVSRGLIGEIISRFEKKGFKLVAMKFVKKSEDHFRKHYESLAKLKFYDGLC 699
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVES 511
KYMS PV MVWEGL VVKT R MLG T+P S PGTIRGD I +GRNIIHGSD+VE+
Sbjct: 700 KYMSQTPVCAMVWEGLGVVKTARVMLGETDPAKSLPGTIRGDFSIHIGRNIIHGSDAVET 759
Query: 512 AKKEIGLWFTDXEVVGWTPANENWVYE 592
AK+EI LWF D E+V WTP N W+YE
Sbjct: 760 AKEEIALWFKDDELVDWTPCNNPWMYE 786
Score = 124 bits (298), Expect = 1e-28
Identities = 65/108 (60%), Positives = 76/108 (70%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RTFIMVKPDGVQRGLVG II+RFE+KGFKLV LK V S+E L++HY+DLA PF+PGLV
Sbjct: 128 RTFIMVKPDGVQRGLVGEIIKRFEQKGFKLVALKMVQESEEHLKKHYADLAHLPFYPGLV 187
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVG 475
K+MSSGPVV M DS+PGTIRGD C+ +G
Sbjct: 188 KFMSSGPVVAMA--------------------DSKPGTIRGDFCVHIG 215
>SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 TFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLVK 334
T ++KP+ V+ I +R ++ GFK+ K V S+EL Q Y + + FF GL
Sbjct: 675 TVAVIKPE-VEPDQRELIKQRIKEAGFKIQLQKEVTLSKELASQFYHEHEGKDFFEGLTD 733
Query: 335 YMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQ---PGTIRGDLCIQVGRNIIHGSDSV 505
YMSSGP + MV + V R ++G +P ++ P +IR L V +N++HG
Sbjct: 734 YMSSGPTMFMVLSKEDAVSGWRSLMGPVDPEQAKEMAPESIRAALGKDVMKNVVHGPSDP 793
Query: 506 ESAKKEIGLWFTDXEVV 556
E A K I +F + +++
Sbjct: 794 EKAGKVIKEFFPEAKIL 810
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RT +++PD + R +I+ + ++ GF++ K + ++E ++ YS+ + FF LV
Sbjct: 539 RTLALIRPDAL-RSRRESIMSKIQEAGFEIAMSKEMHLTREQAEEFYSEHKDQEFFDTLV 597
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLG---ATNPXDSQPGTIRGDLCIQVGR-NIIHGSD 499
MSSGP++ + + ++ R MLG D P ++R ++ N +HGSD
Sbjct: 598 TNMSSGPMMALCLAREDAIEGWRGMLGPKEVEKAKDEAPESLRAQFQVEDSPINPLHGSD 657
Query: 500 SVESAKKEIGLWF 538
+ E+A+KEI +F
Sbjct: 658 TAENAEKEIQKFF 670
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 479 NIIHGSDSVESAKKEIGLWFTD 544
N +HG DS ESA +E+ +F D
Sbjct: 501 NAVHGCDSNESAARELAFFFPD 522
>SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1373
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 399 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGR 307
R VF T+ HT+ T G E +YF RP K+ R
Sbjct: 194 RAVFNTMVVLHTVLTKGEETLYFERPIKRPR 224
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 399 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGR 307
R VF T+ HT+ T G + +YF RP ++ R
Sbjct: 759 RAVFNTMVVLHTVLTKGEQTLYFERPIRRPR 789
>SB_43132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 399 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGR 307
R VF T+ HT+ T G + +YF RP ++ R
Sbjct: 46 RAVFNTMVVLHTVLTKGEQTLYFERPIRRPR 76
>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
Length = 943
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 222 SKRSIMVPTRPRCTPSGLTIIKVRXRCSCXQ*XITNVXKLNYHRALQP 79
S R IM P +PR S +I V CS + T V + HR L+P
Sbjct: 536 SHRQIMFPPKPRRPGSSPSIRSVASACSKKE-GETLVINMREHRTLRP 582
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,500,017
Number of Sequences: 59808
Number of extensions: 363173
Number of successful extensions: 681
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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