Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I14
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   200   1e-51
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    68   1e-11
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    44   2e-04

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  200 bits (488), Expect = 1e-51
 Identities = 93/148 (62%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = +2

Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
           RTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L+
Sbjct: 6   RTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLI 65

Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVES 511
           +YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+S
Sbjct: 66  EYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDS 125

Query: 512 AKKEIGLWFTDXEVVGW-TPANENWVYE 592
           A +EI  WF   E+  + +P   +WVYE
Sbjct: 126 ANREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 37/79 (46%), Positives = 48/79 (60%)
 Frame = +2

Query: 308 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNII 487
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 488 HGSDSVESAKKEIGLWFTD 544
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
 Frame = +2

Query: 161 IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLVKY 337
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  LV++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 338 MSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAK 517
           +SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  ++A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 518 KEIGLW 535
           KE+ L+
Sbjct: 131 KELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,431,076
Number of Sequences: 27780
Number of extensions: 257691
Number of successful extensions: 706
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)