Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I14
(910 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3, mitoch... 203 1e-52
At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1) ... 202 3e-52
At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4) ... 199 2e-51
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 198 4e-51
At1g17410.1 68414.m02126 nucleoside diphosphate kinase family pr... 85 5e-17
At3g47450.2 68416.m05160 expressed protein 31 1.4
At3g47450.1 68416.m05159 expressed protein 31 1.4
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 5.6
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 5.6
At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)... 28 7.4
At4g22980.1 68417.m03316 expressed protein ; expression supporte... 28 7.4
>At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3,
mitochondrial (NDK3) identical to Nucleoside diphosphate
kinase III, mitochondrial precursor (NDK III) (NDP
kinase III) (NDPK III) (SP:O49203) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain;
Length = 238
Score = 203 bits (495), Expect = 1e-52
Identities = 89/146 (60%), Positives = 112/146 (76%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RTFI +KPDGVQRGL+ II RFE+KGFKLVG+K + PS++ Q+HY DL RPFF GL
Sbjct: 90 RTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLC 149
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVES 511
++SSGPV+ MVWEG V++ GR ++GAT+P S+PGTIRGDL + VGRNIIHGSD E+
Sbjct: 150 DFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPET 209
Query: 512 AKKEIGLWFTDXEVVGWTPANENWVY 589
AK EI LWF E+V +T +E W+Y
Sbjct: 210 AKDEISLWFKPQELVSYTSNSEKWLY 235
>At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1)
identical to identical to Nucleoside diphosphate kinase
I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207)
[Arabidopsis thaliana]; contains Pfam PF00334 :
Nucleoside diphosphate kinase domain;
Length = 169
Score = 202 bits (493), Expect = 3e-52
Identities = 94/164 (57%), Positives = 118/164 (71%)
Frame = +2
Query: 101 LSLXTLVXFHXWQEXRXRTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELL 280
++L L+ ++ +TFIM+KPDGVQRGL+G +I RFEKKGF L GLK + +
Sbjct: 6 INLFCLLRITSNKKTMEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFA 65
Query: 281 QQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDL 460
++HY DL+S+ FF GLV Y+ SGPVV M+WEG NVV TGR ++GATNP S+PGTIRGD
Sbjct: 66 EKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDF 125
Query: 461 CIQVGRNIIHGSDSVESAKKEIGLWFTDXEVVGWTPANENWVYE 592
I +GRN+IHGSDSVESA+KEI LWF D V W + WVYE
Sbjct: 126 AIDIGRNVIHGSDSVESARKEIALWFPDGP-VNWQSSVHPWVYE 168
>At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4)
contains Pfam PF00334 : Nucleoside diphosphate kinase
domain; identical to nucleoside diphosphate kinase 4
(GI:11990430) [Arabidopsis thaliana]
Length = 237
Score = 199 bits (486), Expect = 2e-51
Identities = 89/146 (60%), Positives = 110/146 (75%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RTFI +KPDGVQRGL+ II RFE+KG+KLVG+K + PS+ Q+HY DL RPFF GL
Sbjct: 89 RTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLC 148
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVES 511
++SSGPVV MVWEG V++ GR ++GAT+P S+PGTIRGDL + VGRNIIHGSD E+
Sbjct: 149 NFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPET 208
Query: 512 AKKEIGLWFTDXEVVGWTPANENWVY 589
AK EI LWF E+V +T E W+Y
Sbjct: 209 AKDEISLWFKPEELVSYTSNAEKWIY 234
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 198 bits (483), Expect = 4e-51
Identities = 85/146 (58%), Positives = 112/146 (76%)
Frame = +2
Query: 155 TFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLVK 334
T+IMVKPDG+QRGLVG II RFEKKGFKL+GLK +EL ++HY DL+++ FFP L++
Sbjct: 86 TYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIE 145
Query: 335 YMSSGPVVPMVWEGLNVVKTGRHMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESA 514
Y++SGPVV M WEG+ VV + R ++G T+P ++PGTIRGDL +Q GRNI+HGSDS E+
Sbjct: 146 YITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENG 205
Query: 515 KKEIGLWFTDXEVVGWTPANENWVYE 592
K+EIGLWF + E+ W A W+ E
Sbjct: 206 KREIGLWFKEGELCKWDSALATWLRE 231
>At1g17410.1 68414.m02126 nucleoside diphosphate kinase family
protein contains Pfam PF00334 : Nucleoside diphosphate
kinase domain; similar to Nucleoside diphosphate kinase
homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5)
(Testis-specific nm23 homolog) (Inhibitor of p53-induced
apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens}
Length = 181
Score = 85.4 bits (202), Expect = 5e-17
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +2
Query: 152 RTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSQELLQQHYSDLASRPFFPGLV 331
RT M+KPDGV I + GF +V +E Y + +SR FFP LV
Sbjct: 34 RTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHLV 93
Query: 332 KYMSSGPVVPMVWEGLNVVKTGRHMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDS 502
YM+SGPV+ MV E N V R ++G T+ S P +IR +N +HGSDS
Sbjct: 94 TYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVHGSDS 153
Query: 503 VESAKKEIGLWFTD 544
SA++EI +F D
Sbjct: 154 TSSAEREIKFFFKD 167
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 534 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESXGLVAPSI*RPVFTTLRPSHTI 361
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 360 GTTGPE 343
GT+G E
Sbjct: 536 GTSGTE 541
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 534 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESXGLVAPSI*RPVFTTLRPSHTI 361
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 360 GTTGPE 343
GT+G E
Sbjct: 536 GTSGTE 541
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 579 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 472
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 579 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 472
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 386
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 505 NAVRTMDDVTPNLNAEITADSAGLRV 428
NA+R DDV+P +N A +GLRV
Sbjct: 79 NALRQADDVSPEINTTKLAFVSGLRV 104
>At4g22980.1 68417.m03316 expressed protein ; expression supported
by MPSS
Length = 559
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 197 VGTIIERFEKKGFKLVGLKFVWPSQELLQQ 286
V +I EKKG K +F WPS E+L +
Sbjct: 205 VEEMIRISEKKGIKPQSAEFSWPSTEILSE 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,645,599
Number of Sequences: 28952
Number of extensions: 239551
Number of successful extensions: 569
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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