Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I12
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...   111   7e-25
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...   111   7e-25
AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical ...    41   0.001
L16559-1|AAA27934.2|  397|Caenorhabditis elegans Hypothetical pr...    31   0.85 
U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily ass...    30   2.0  
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score =  111 bits (267), Expect = 7e-25
 Identities = 46/90 (51%), Positives = 68/90 (75%)
 Frame = +3

Query: 594 VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLAL 773
           ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NFKRKSVVGLNFDFL+L
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSL 167

Query: 774 NIMGFTMYSLFNCGLYFLKRFRTSTSVVTP 863
           N++GF  Y++FN  +Y+    +   ++V P
Sbjct: 168 NLVGFCAYAIFNLLMYYNSHVKNEYNIVNP 197



 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 642 EINIISYI--MGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLALNIMGFTM 794
           +I ++S++  + +I  A     ++PQ Y N+ RKS VG +   + L+  G T+
Sbjct: 261 KIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTL 313



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 803 FQLWTVFSKEIQNEYFSRHPRGLNPVQLNDV 895
           F L   ++  ++NEY   +PR   PV LNDV
Sbjct: 178 FNLLMYYNSHVKNEYNIVNPRSPPPVLLNDV 208


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score =  111 bits (267), Expect = 7e-25
 Identities = 46/90 (51%), Positives = 68/90 (75%)
 Frame = +3

Query: 594 VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLAL 773
           ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NFKRKSVVGLNFDFL+L
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSL 167

Query: 774 NIMGFTMYSLFNCGLYFLKRFRTSTSVVTP 863
           N++GF  Y++FN  +Y+    +   ++V P
Sbjct: 168 NLVGFCAYAIFNLLMYYNSHVKNEYNIVNP 197



 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 642 EINIISYI--MGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLALNIMGFTM 794
           +I ++S++  + +I  A     ++PQ Y N+ RKS VG +   + L+  G T+
Sbjct: 261 KIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTL 313



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 803 FQLWTVFSKEIQNEYFSRHPRGLNPVQLNDV 895
           F L   ++  ++NEY   +PR   PV LNDV
Sbjct: 178 FNLLMYYNSHVKNEYNIVNPRSPPPVLLNDV 208


>AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical
           protein Y43H11AL.2 protein.
          Length = 311

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +3

Query: 642 EINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLALNIMGFT 791
           ++ ++ +I+G I  A W +  +PQ++ N+K K   GL+  FL   ++G T
Sbjct: 37  DLKLLGFIIGLISLALWLIPLFPQLWQNYKTKKCEGLSLAFLFFWLVGDT 86


>L16559-1|AAA27934.2|  397|Caenorhabditis elegans Hypothetical
           protein C06E1.3 protein.
          Length = 397

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -3

Query: 409 LYWPIWTSLSSRVSSTNRFRSVTSTYILSNWECALGIPKINITTKQKRIL 260
           L +P W S S  + +  +FR  ++  IL+     +G+ K+N+T K +R+L
Sbjct: 71  LIYPCWASGSQMIYT--QFRGHSNERILAKIGVEIGLQKVNVTLKFERLL 118


>U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 257 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 408 NTSLEVISNIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAY 539
           +  ++++  +QH +I+QL   S E   SN   K   IS + C +
Sbjct: 81  DNEIDMMKKLQHENIIQLFDASAESRSSNRSVKEYKISMEYCKF 124


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 210 CSAVLRPRAAACSISSHRIRFCLVVMLILGIPSAHSQLDKMYVEVTDLNLLVEETRLLKL 389
           C AVLR  +   +  S    F ++ +L+L   S    L  MY  V      VEE + L++
Sbjct: 369 CRAVLRHSSDVLASRSVTRNFIIIALLVLAAASVGFGLFFMYTRVAGERKKVEEGKYLQI 428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,493,569
Number of Sequences: 27780
Number of extensions: 419079
Number of successful extensions: 1095
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)