BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_I10 (885 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 3.3 Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 3.3 Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 3.3 U53336-10|AAA96182.2| 125|Caenorhabditis elegans Hypothetical p... 29 5.8 AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 28 7.7 AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 28 7.7 >Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical protein C36B1.12c protein. Length = 662 Score = 29.5 bits (63), Expect = 3.3 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 519 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 415 +RQ + + +A C HVL C+ +P + WI++L Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425 >Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical protein C36B1.12b protein. Length = 640 Score = 29.5 bits (63), Expect = 3.3 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 519 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 415 +RQ + + +A C HVL C+ +P + WI++L Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425 >Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical protein C36B1.12a protein. Length = 652 Score = 29.5 bits (63), Expect = 3.3 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 519 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 415 +RQ + + +A C HVL C+ +P + WI++L Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425 >U53336-10|AAA96182.2| 125|Caenorhabditis elegans Hypothetical protein K07C11.10 protein. Length = 125 Score = 28.7 bits (61), Expect = 5.8 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -3 Query: 763 LERTTYTELRYLQREL*ESATLPEGRKXDRYPVSGRVGNRRAHEGAS 623 L+ T +L +QRE E +PEG+K R P S + +++EG S Sbjct: 66 LKTITTQKLEKMQREQMERLQVPEGQKA-RTPESAEAESPKSNEGPS 111 >AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical protein Y61A9LA.10 protein. Length = 986 Score = 28.3 bits (60), Expect = 7.7 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +1 Query: 583 KPDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPXFSLREAWRFLIAHAVGI 735 K +I +PGV ++ S PC LPD +L E R + A G+ Sbjct: 220 KNHSSIHVPGVGDMRISNVTSLPDPCPLPDEIKKRALNEKERKVYAPFSGL 270 >AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical protein Y24D9A.5 protein. Length = 282 Score = 28.3 bits (60), Expect = 7.7 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +2 Query: 410 GGNTVIHRIRGITQERTCEQKASKRPGTVK 499 GG +V +R + Q+++ ++SKRPG ++ Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPGILQ 196 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,358,925 Number of Sequences: 27780 Number of extensions: 334963 Number of successful extensions: 848 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 848 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2234373834 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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