Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I09
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 30 1.8
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical... 30 2.4
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical... 28 7.4
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 28 9.8
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 498 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 635
+ EA SST LL ST TA +S T ++RSI + TA ++++PL
Sbjct: 91 TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 695 VTDDNLVVIDWRKGVRRSLSXNDVMSYFMEDVDLNPTCTTSP 820
V++DN +I W++ V ++ N + + D+ N C SP
Sbjct: 404 VSEDNAKIIAWKQKVELMVAHNKRLREKLRDISKNSKCDLSP 445
>AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.31 protein.
Length = 209
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -3
Query: 574 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 395
GQV L V + S ++ + + + F + ++P E + ++V+ +DF G F ++
Sbjct: 51 GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109
Query: 394 GVDEGLSTREXA 359
G S E A
Sbjct: 110 AHFAGKSQEEIA 121
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3
Query: 478 RSPHENIEVLSVVEDSEDFD 419
R+P+ENI++L +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600
>Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical
protein F37B1.2 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = -3
Query: 589 DLVRSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 410
D GQ+ L V E S ++ + + F ++P E V +VV+ +DF G F
Sbjct: 46 DKTPMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKDFFGEF 104
Query: 409 HLELVGVDEGLSTRE 365
++ G S E
Sbjct: 105 RKLIIAQRAGKSVEE 119
>Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical
protein F14F3.3 protein.
Length = 453
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 236 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGXLPRGETFVHTNELQME 412
I+ PT ++ NIE S D +N+D+ K +F + ++ G + L +
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331
Query: 413 EAVKVFRV 436
VKV RV
Sbjct: 332 SRVKVMRV 339
>AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.33 protein.
Length = 209
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = -3
Query: 574 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 395
GQV L+V + S ++ + + + F + ++P E ++V+ +DF G F ++
Sbjct: 51 GQVPVLSVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIM 109
Query: 394 GVDEGLSTREXA 359
G E A
Sbjct: 110 AQRSGKPAEEIA 121
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 272 IAKEYNIEKSCDKYMNVDVVKQ 337
+ + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 272 IAKEYNIEKSCDKYMNVDVVKQ 337
+ + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 495 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLT 611
G+TE S+ T +TEPT ST T ++PTS+ T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTST 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,587,747
Number of Sequences: 27780
Number of extensions: 307833
Number of successful extensions: 788
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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