Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I08
(897 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 116 8e-25
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 92 2e-17
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 88 2e-16
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 87 8e-16
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 82 2e-14
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 78 3e-13
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 78 3e-13
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 75 2e-12
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 72 2e-11
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 72 2e-11
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 71 3e-11
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 70 9e-11
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 66 1e-09
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 59 1e-07
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 57 7e-07
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 56 1e-06
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 44 0.005
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.037
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 40 0.065
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 37 0.61
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 36 1.1
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 36 1.1
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 33 7.5
UniRef50_Q74E61 Cluster: Long-chain-fatty-acid--CoA ligase, puta... 33 9.9
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 33 9.9
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 116 bits (279), Expect = 8e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 4e-22
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/94 (45%), Positives = 57/94 (60%)
Frame = +3
Query: 108 LLPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYH 287
++P F K WQ++VKTWFN PAR+ R + GPLRP+V T++Y+
Sbjct: 6 VIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYN 65
Query: 288 TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
KVRAG GFTL E++ AG+ A TIGI+VD R
Sbjct: 66 MKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHR 99
Score = 75.4 bits (177), Expect = 2e-12
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPAPK 573
N+S+E LQ VQR+K Y+A+L++FP+ + +K G++ EE ATQ++G MP+
Sbjct: 102 NRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAA 161
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDA 690
+T D K FKAY +R R+ A+ G RAKR +A
Sbjct: 162 MELVKLTADLKAFKAYDKIRLERTNARHAGARAKRAAEA 200
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/94 (43%), Positives = 56/94 (59%)
Frame = +3
Query: 108 LLPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYH 287
++P G F K WQ VK WFN P ++ R K LRP+V CP+ RY
Sbjct: 7 MIPNGHFHKKWQQKVKLWFNQPMKKLRRKALRAKKSRQLAPKPTE-LLRPLVHCPSERYK 65
Query: 288 TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
+KVRAG GFT +E++ AG++ +AR+ G+AVDPR
Sbjct: 66 SKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPR 99
Score = 46.8 bits (106), Expect = 7e-04
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGK-KVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
N+ ES+ +QR+ EY++RLI P K KVLK + + L V+ K
Sbjct: 102 NRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGKN-----------LNVVKVVPGK 150
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKR 678
A + E+EK F+A+ LR AR K GIR KR
Sbjct: 151 VKALKVGEEEKKFEAFVTLRRARCDEKFAGIRMKR 185
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 86.6 bits (205), Expect = 8e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 111 LPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHT 290
+P K W VKT+F+ PAR R + GPLRPIVRCPTVRY+
Sbjct: 29 IPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNM 88
Query: 291 KVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
K R G GFT +E+ AAG +P AR GIAVD R
Sbjct: 89 KTRLGRGFTPKELVAAGFDPALARFQGIAVDAR 121
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 82.2 bits (194), Expect = 2e-14
Identities = 40/94 (42%), Positives = 54/94 (57%)
Frame = +3
Query: 108 LLPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYH 287
+L F K WQ VK WF+ P + R + LRP VRCPT+RY+
Sbjct: 8 ILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPTLRYN 66
Query: 288 TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
TK+R+G GFT+ E++AAGL +AR++GI VD R
Sbjct: 67 TKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHR 100
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKS 576
NKS ESL++ V+RIK Y+ARL++ PK K K + + A + ++P+
Sbjct: 103 NKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEAE 162
Query: 577 VARPITEDEKXFKAYQYLRGARSIAKLVG-IRAKRLKDAAE 696
R IT +EK F AY+ LR AR + G ++A+ K E
Sbjct: 163 KPRAITSEEKEFNAYETLRKARGTHRAAGKVKARIAKKEEE 203
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 78.2 bits (184), Expect = 3e-13
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +3
Query: 246 PLRPIVRCPTVRYHTKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
P+RPIVRCPTVRYHTKVR G GF+L EIR AG++ ARTI I+VDP+
Sbjct: 12 PIRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 78.2 bits (184), Expect = 3e-13
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V+ F+ P R++R + + LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVD-KLRPVVRCPTVKYNRRVRVG 89
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GFTL E++ AG+ ART+GIAVD R
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHR 117
Score = 47.2 bits (107), Expect = 6e-04
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGK---KVLKGEANEEERKLA-----------TQL 534
N S ESL V R+K+Y+ARLILFP+ K L A+E A T
Sbjct: 120 NYSKESLVANVARLKDYKARLILFPRKSGQFKKLDSSADEVNAAKAAFAAEGKTEGYTTK 179
Query: 535 RGPLMPVQQPAPKSVARPITEDE---KXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPD 705
G + P++ + + DE AY+ LR RS A+ GIR KR K AE
Sbjct: 180 LGAIFPIKNISAAEAVTEVKRDELPKGEEAAYRRLRETRSEARYKGIREKRAKAKAEEES 239
Query: 706 DVTK 717
K
Sbjct: 240 AAKK 243
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V+ F+ ++ + + + LRP+VR PTV+Y+ KVRAG
Sbjct: 14 FRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAG 72
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GFTL E++A G+ P +ARTIGI+VD R
Sbjct: 73 RGFTLAELKAVGIAPKYARTIGISVDHR 100
Score = 60.1 bits (139), Expect = 8e-08
Identities = 39/100 (39%), Positives = 57/100 (57%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKS 576
NKS E+ V R++EY+++L++F K K + + E+ AT PV+QPAP+S
Sbjct: 103 NKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAPES 156
Query: 577 VARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAE 696
R + E+ AY+ LR AR+ K GIR KR K+ AE
Sbjct: 157 GLRAVEVPEQ--TAYRTLRLARNEKKYKGIREKRAKEKAE 194
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 72.1 bits (169), Expect = 2e-11
Identities = 38/96 (39%), Positives = 52/96 (54%)
Frame = +3
Query: 108 LLPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYH 287
++P + K ++ ++KTW+N P R+ + G LRPIV PT RY+
Sbjct: 6 VIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYN 64
Query: 288 TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR*T 395
K R G GFTL E+ A G+N A +IGIAVD R T
Sbjct: 65 MKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRT 100
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = +3
Query: 111 LPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHT 290
LP K W FVKT++N PA + R + LRP+VR T++Y++
Sbjct: 7 LPNAHMRKHWTRFVKTFYNQPAAKRRRQLRR-RAQALSASPRPVELLRPVVRGQTIKYNS 65
Query: 291 KVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
+ G GF+L E++ AGLN FART+GI+VD R
Sbjct: 66 VQKLGRGFSLIELKEAGLNAAFARTVGISVDHR 98
Score = 41.5 bits (93), Expect = 0.028
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPK--GKK---VLKGEANEEERKLATQLRGPLMPVQQ 561
N + E L V+R+K Y ++L+L+P+ GK V+K NE Q P + Q
Sbjct: 101 NLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLTFQ 160
Query: 562 PAPK-SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAE 696
PK A I+++ + Y+ LR AK VG++ KR K A E
Sbjct: 161 RTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGVKEKR-KQAKE 205
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/80 (46%), Positives = 48/80 (60%)
Frame = +3
Query: 150 VKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAGXGFTLREI 329
VK +FN PA++ R + + LRP V CPTVRY+ K R G GF+L E+
Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96
Query: 330 RAAGLNPVFARTIGIAVDPR 389
+AAG+ P +ARTIGI VD R
Sbjct: 97 KAAGVKPRYARTIGIRVDRR 116
Score = 63.3 bits (147), Expect = 8e-09
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLR-----GPLMPVQ 558
NKS E + I VQR+K Y ++L+LFP KK KG+A EEE K ATQ R + +
Sbjct: 119 NKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGGLV 178
Query: 559 QPAPKSVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRL--KDAAEN 699
PA + R +TE+E K Y++L+ S + R +R K+A EN
Sbjct: 179 TPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRARNRRAARKEAKEN 226
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 69.7 bits (163), Expect = 9e-11
Identities = 36/88 (40%), Positives = 48/88 (54%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K W+S V TW P R+ R + L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L+E+RAA ++ ARTIGIAVDPR
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPR 98
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 66.1 bits (154), Expect = 1e-09
Identities = 37/94 (39%), Positives = 47/94 (50%)
Frame = +3
Query: 108 LLPXGXFXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYH 287
+LP K WQ +V+ FN +R + + L P+V CPT RY+
Sbjct: 7 VLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQRYN 65
Query: 288 TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
K R G GFTL EI+A L P AR+IGI VD R
Sbjct: 66 YKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKR 99
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +3
Query: 243 GPLRPIVRCPTVRYHTKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR*TQQVC*IIAN 422
G LRP+V P+ RY+ K+R G GFTL+E++ AGL AR++G+AVD R T + +
Sbjct: 51 GYLRPLVHMPSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNL 110
Query: 423 XCSKNKGIQSASYTVPERQKGAEG 494
++ K S P ++ +G
Sbjct: 111 NVNRLKTYLSKLVLFPRKKHAKKG 134
Score = 52.4 bits (120), Expect = 2e-05
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFPKGKKVLKGEA-------NEEERKLA--TQLRGPLM 549
NK ESL + V R+K Y ++L+LFP+ K KG A E+ R LA Q +M
Sbjct: 102 NKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVM 161
Query: 550 PVQQPAPKSVARPITEDEKXFKAYQYLRGARSIAK 654
PV Q K R +TE + Y LR AR AK
Sbjct: 162 PVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 56.8 bits (131), Expect = 7e-07
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3
Query: 249 LRPIVRCPTVRYHTKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
LRPIVRCPT++Y+ R G GFT E AGL+ AR +GIAVD R
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 120 GXFXKXWQSFVKTWFNXPARRY-RXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKV 296
G F K W++ V T FN P + R K L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 297 RAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
+ G GF+++EI+ + + A + GI++D R
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKR 100
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 243 GPLRPIVRCPTVRYHTKVRAGXGFTLREIRAAGL 344
GPLRP+V T++Y+ KV GFTL E++AAG+
Sbjct: 50 GPLRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.037
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -3
Query: 364 VRANTGFNPAALISRRVXPLPARTLVWYRTVGXRTIGRNGPAAGRG 227
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 40.3 bits (90), Expect = 0.065
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 111 LPXGXFXKXWQSFVKTWFNXPARRYR 188
LP F K WQ +VKTWFN P R+ R
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLR 37
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 37.1 bits (82), Expect = 0.61
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 469 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKXFKAYQYLR 633
PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L+
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQILQ 349
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 36.3 bits (80), Expect = 1.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 255 PIVRCPTVRYHTKVRAGXGFTLREIR 332
PIV+C T++Y+ K RAG GF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 36.3 bits (80), Expect = 1.1
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 252 RPIVRCPTVRYH---TKVRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
+P+V+ P H K + G GF++ E+RA GL+ AR +GI VD R
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 33.5 bits (73), Expect = 7.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYR 188
F K WQ V TWFN PAR+ R
Sbjct: 14 FHKDWQRRVATWFNQPARKIR 34
>UniRef50_Q74E61 Cluster: Long-chain-fatty-acid--CoA ligase,
putative; n=37; cellular organisms|Rep:
Long-chain-fatty-acid--CoA ligase, putative - Geobacter
sulfurreducens
Length = 552
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 478 CLSGTV*DALCIPLFFEHXF-AMIQQTCCVXRGSTAIPI 365
C+ T D LCIP+ F H F ++ CV G+T +P+
Sbjct: 225 CMKFTEKDRLCIPVPFFHCFGCVLGVMACVTHGTTMVPV 263
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 33.1 bits (72), Expect = 9.9
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 294 VRAGXGFTLREIRAAGLNPVFARTIGIAVDPR 389
VR G GF+L E+ AGL+ AR +G+ VD R
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,730,388
Number of Sequences: 1657284
Number of extensions: 9744197
Number of successful extensions: 21280
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 20685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21257
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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