Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I08
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 116 1e-25
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 116 1e-25
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 116 1e-25
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 116 1e-25
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 116 1e-25
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 73 1e-12
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 104 bits (249), Expect = 5e-22
Identities = 49/88 (55%), Positives = 57/88 (64%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRC TVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 1e-25
Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 397 NKSVESLQIXVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 573
NKS ESLQ VQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 574 SVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 717
AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
Score = 107 bits (257), Expect = 5e-23
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = +3
Query: 126 FXKXWQSFVKTWFNXPARRYRXKXNXIXXXXXXXXXXXXGPLRPIVRCPTVRYHTKVRAG 305
F K WQ V TWFN PAR+ R + GP+RPIVRCPTVRYHTKVRAG
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
Query: 306 XGFTLREIRAAGLNPVFARTIGIAVDPR 389
GF+L E+R AG++ ARTIGI+VDPR
Sbjct: 74 RGFSLEELRVAGIHKKVARTIGISVDPR 101
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 73.3 bits (172), Expect = 1e-12
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +1
Query: 517 KLATQLRGPLMPVQQPAPKSVARPITEDEKXFKAYQYLRGARSIAKLVGIRAKRLKDAAE 696
KLATQL GP+MPV+ K AR ITE+EK FKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,058,663
Number of Sequences: 237096
Number of extensions: 1546147
Number of successful extensions: 2985
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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