Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I02
(889 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.70
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 0.70
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.70
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 0.70
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.70
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.92
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.92
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.92
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.92
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.92
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.5
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 194 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 210 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 250
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 162 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
+E +K+ N +RN +H SSR + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREY 245
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 165 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 165 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 165 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 165 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 284
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 503 QWNLAAANIR*GALAVVLPTVP 438
+WN + N++ G VVL VP
Sbjct: 1505 EWNQVSNNVKPGGNFVVLDLVP 1526
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,751
Number of Sequences: 438
Number of extensions: 2835
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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