Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_I01
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 395 PADKICEKLKKKDAQICDLRFDKQID 472
           P D IC K +K    +  LR  K++D
Sbjct: 455 PLDAICNKPRKDAVCVSQLRNAKKVD 480


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 236 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 141
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 236 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 141
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 236 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 141
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 559 DATIADLIPVVQNLLQVT 506
           + T  DL+P  QNLL+ T
Sbjct: 279 EITRTDLVPAFQNLLKDT 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,275
Number of Sequences: 336
Number of extensions: 3201
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)