Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_I01
(880 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24440.1 68415.m02921 expressed protein 30 2.3
At4g03200.1 68417.m00437 expressed protein contains Pfam PF03190... 29 4.1
At1g69220.2 68414.m07926 serine/threonine protein kinase, putati... 29 4.1
At1g69220.1 68414.m07925 serine/threonine protein kinase, putati... 29 4.1
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 28 9.5
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 28 9.5
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 28 9.5
At1g05040.1 68414.m00505 hypothetical protein 28 9.5
>At2g24440.1 68415.m02921 expressed protein
Length = 183
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 218 AATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGIL 361
AA +D D KKI E K CK K + N GLEE+ GI+
Sbjct: 86 AAEKEEDDDSDKKKIVIEHCKQCKSFKERANE---VKEGLEEAVPGII 130
>At4g03200.1 68417.m00437 expressed protein contains Pfam PF03190:
Protein of unknown function, DUF255
Length = 818
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 335 LEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDLRFDKQID 472
L +S T + ELSK LS S ADK+ + + ++ C + + D
Sbjct: 230 LVKSGTYAIEELSKALSASTGADKLSDGISREAVSTCAKQLSRSYD 275
>At1g69220.2 68414.m07926 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 809
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 156 RWSYHFEKVIAKCV*KL*RSLPPRYQMM*RKTLKKSRQN-SKSSVKVQRTKKI 311
+WS F +AKC+ K R P +M+ K +++ + S S K++++++I
Sbjct: 444 KWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQI 496
>At1g69220.1 68414.m07925 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 836
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 156 RWSYHFEKVIAKCV*KL*RSLPPRYQMM*RKTLKKSRQN-SKSSVKVQRTKKI 311
+WS F +AKC+ K R P +M+ K +++ + S S K++++++I
Sbjct: 471 KWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQI 523
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 242 KKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKI 409
KKD KK + K+NR GGL TG L ++ KP+ P KI
Sbjct: 852 KKDNPPDSPRSKKLATAANKKKNR----KGGLSMFLTGALDDVPKPVVAPPPRPKI 903
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 242 KKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKI 409
KKD KK + K+NR GGL TG L ++ KP+ P KI
Sbjct: 849 KKDNPPDSPRSKKLATAANKKKNR----KGGLSMFLTGALDDVPKPVVAPPPRPKI 900
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +2
Query: 236 DVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKICE 415
DVKK FKK C G N +R ++ L E AT I GE S ++W A I E
Sbjct: 155 DVKKQTGDFGKVFKKTCMGKTNAVSR--KWIEALSEVAT-IAGEHS--INWDTEAAMI-E 208
Query: 416 KL 421
K+
Sbjct: 209 KI 210
>At1g05040.1 68414.m00505 hypothetical protein
Length = 166
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 254 KKIEAEFKKFCKGSKNKENRFCYYLGG----LEESATGILGELSKPL 382
K+ + +FCK + ++ YYL G LE++ +G LG+ PL
Sbjct: 2 KEEDTNVTRFCKATSACKDAAFYYLEGFDWNLEDAISGFLGDQLPPL 48
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,867
Number of Sequences: 28952
Number of extensions: 262951
Number of successful extensions: 645
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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