Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H24
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    50   3e-08
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    39   5e-05
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   4.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 49.6 bits (113), Expect = 3e-08
 Identities = 28/85 (32%), Positives = 42/85 (49%)
 Frame = +1

Query: 364 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERIXGGXFVYAFTAACFH 543
           L R E F        + A K+ R+   A+  D  +  A + R+R+    F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 544 RTDCKGLYLPAPYEIYPYFFVDSHV 618
           R D + L LP+   ++P  +VDS V
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQV 158



 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 765 MSYFMEDVDLNPYMYXLHMNYPF 833
           ++Y+ ED+ LN + +  H+ YPF
Sbjct: 194 VAYWREDIGLNLHHWHWHLVYPF 216


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +1

Query: 448 KDFDVFMRTACWMRERIXGGXFVYAFTAACFHRTDCKGLYLPAPYEIYPYFFVDSHV 618
           ++ D  +  A + R+R+    F YA + A  HR D + + LP+  E +P  +VDS V
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKV 158



 Score = 27.1 bits (57), Expect = 0.20
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 765 MSYFMEDVDLNPYMYXLHMNYPF 833
           ++YF ED+ +N + +  H+ YPF
Sbjct: 194 LAYFREDLGINLHHWHWHLVYPF 216



 Score = 25.0 bits (52), Expect = 0.80
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 675 PEDRVLGGFSHLHHKGFTXDMAVNEE 598
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 265 KEIAKEYNIEKSCDKYMNVDVVKXFMEMYKMGXLPRGETFV 387
           ++I   YN E+ C+K         F E  K    P+ ++ V
Sbjct: 237 QQIIARYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDSLV 277


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 786 VDLNPYMYXLHMNYP 830
           V LNPY + L + YP
Sbjct: 25  VPLNPYQFFLAVQYP 39


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 516 DEXASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 409
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 190 DMKMKELCIMKLLDHI 237
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,864
Number of Sequences: 336
Number of extensions: 3150
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)