Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H24
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical...    29   6.0  

>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 497 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 634
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 477 RSPHENIEVLSVVEDSEDFD 418
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.31 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = -3

Query: 573 GQVETLAVGSVEARGSKSVDEXASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 394
           GQV  L V   +   S ++    + + F +  ++P E +   ++V+  +DF G F   ++
Sbjct: 51  GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109

Query: 393 GVDEGLSTREXA 358
               G S  E A
Sbjct: 110 AHFAGKSQEEIA 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,159,498
Number of Sequences: 27780
Number of extensions: 289473
Number of successful extensions: 665
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)