Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H23
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 138 2e-31
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 129 1e-28
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 88 2e-16
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 77 8e-13
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 75 3e-12
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 74 4e-12
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 73 1e-11
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 52 2e-05
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 50 8e-05
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 42 0.016
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 38 0.34
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 36 1.0
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 35 3.2
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 138 bits (334), Expect = 2e-31
Identities = 67/85 (78%), Positives = 67/85 (78%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD VA VKKG PELRKKVMPAVV R R PF RR GVFIYFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
AG FRISLGLPVGAV+NCADNTG
Sbjct: 10 AGGKFRISLGLPVGAVMNCADNTG 33
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 129 bits (311), Expect = 1e-28
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAA GD V VKKG PELRKKV A++ R + + R G I FE A V +
Sbjct: 53 GRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLI 112
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G ++G+ GPV +E AD+WP+
Sbjct: 113 NNKGELRGAQIAGPVPREVADMWPK 137
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 76.6 bits (180), Expect = 8e-13
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +3
Query: 219 RLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXVX 398
R++ LPAA GD + VKKG ELRK+V AV+ R + P R GV + FE A V
Sbjct: 52 RVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTT 111
Query: 399 NXGXMKGSAXTGPVAKECADLWPR 470
G MKG+ GPVA E ++ WPR
Sbjct: 112 PEGEMKGTDIKGPVAAEASEKWPR 135
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = +3
Query: 231 LPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXVXNXGX 410
+P AG GD +V V++G PELRK++ A+V R R P+ R G ++ FE A V V G
Sbjct: 56 IPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGD 115
Query: 411 MKGSAXTGPVAKECADLWP 467
KGS GPVA E WP
Sbjct: 116 PKGSEIHGPVAMEATLRWP 134
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
G N +P AG GD V VKKG PE+RK+++ AVV R + F R G+ + FE A V
Sbjct: 39 GVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVIT 98
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
G KG+ GPVA+E A+ +P+
Sbjct: 99 DEDGIPKGTDIKGPVAREVAERFPK 123
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
G L +AG GD +VA VKKG P++R +V+ AV+ R R + R G+ + FE A V V
Sbjct: 48 GTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIV 107
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
G +G+ GPVA+E A+ W R
Sbjct: 108 TPEGVPRGTEIRGPVAREAAEKWVR 132
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 56.4 bits (130), Expect = 9e-07
Identities = 34/83 (40%), Positives = 38/83 (45%)
Frame = -3
Query: 475 AIRGHRSAHSLATGPVXAEPFIXPXLXTXTPAXXSKYIXTPXRLXNGXRXLXTTAGITFF 296
A GH S S ATGP+ + PF+ P T A SK TP L G L TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 295 RSSGXPFLTXATIXSPEPAAGXL 227
+S PF T SP A G L
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNL 96
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 52.0 bits (119), Expect = 2e-05
Identities = 36/87 (41%), Positives = 40/87 (45%)
Frame = -3
Query: 475 AIRGHRSAHSLATGPVXAEPFIXPXLXTXTPAXXSKYIXTPXRLXNGXRXLXTTAGITFF 296
AI GH SA SLA GP+ + PF P T A SK I P L G L TA F
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCLTITALNFCF 79
Query: 295 RSSGXPFLTXATIXSPEPAAGXLFRRP 215
+SG PFL S A G L + P
Sbjct: 80 LTSGVPFLIDTITISAMLANGTLLKTP 106
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 19 SGAKFRISLGLPVGAVINCADNTG 42
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 42.3 bits (95), Expect = 0.016
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+G +++S GLPVGAV+NCADNTG
Sbjct: 50 SGTKYKMSYGLPVGAVVNCADNTG 73
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 37.9 bits (84), Expect = 0.34
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 115 FRISLGLPVGAVINCADNTG 174
FRISLGLP GAVIN AD+TG
Sbjct: 14 FRISLGLPAGAVINYADSTG 33
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 36.3 bits (80), Expect = 1.0
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Frame = +3
Query: 240 AGSGDXIVAXVKKGXPEL-----------RKKVMPAVVXRXRXPFXRRXGVFIYFEXXAG 386
A GD I+ VK P K V AVV R R G +I F+ A
Sbjct: 33 ASVGDEIIVAVKDAQPAFGLKDSTGKKVHNKAVQRAVVVRTTKEIRRPDGSYIRFDDNAC 92
Query: 387 VXVXNXGXMKGSAXTGPVAKECAD 458
+ + G KG+ GPVA+E D
Sbjct: 93 AIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 34.7 bits (76), Expect = 3.2
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 288 ELRK-KVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXVXNXGXMKGSAXTGPVAKE 449
++RK + AVV R + R G + F+ A V + N G M G+ GPVA E
Sbjct: 70 KIRKGDIRRAVVVRVKKTTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,990,129
Number of Sequences: 1657284
Number of extensions: 7817959
Number of successful extensions: 13694
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13229
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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