Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H23
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142...   121   9e-28
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212...   121   9e-28
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314...   121   9e-28

>10_08_0319 -
           16712572-16712654,16712756-16712797,16713955-16714239,
           16714346-16714358
          Length = 140

 Score =  121 bits (291), Expect = 9e-28
 Identities = 55/85 (64%), Positives = 65/85 (76%)
 Frame = +3

Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
           GRLN LP+A  GD ++A VKKG P+LRKKVMPAV+ R R P+ R+ GV++YFE  AGV V
Sbjct: 47  GRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIV 106

Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
              G MKGSA TGP+ KECADLWPR
Sbjct: 107 NPKGEMKGSAITGPIGKECADLWPR 131



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
           AG  FR+SLGLPV A +NCADNTG
Sbjct: 10  AGNKFRMSLGLPVAATVNCADNTG 33


>03_01_0276 +
           2124538-2124550,2124678-2124962,2126813-2126854,
           2126943-2127025
          Length = 140

 Score =  121 bits (291), Expect = 9e-28
 Identities = 55/85 (64%), Positives = 65/85 (76%)
 Frame = +3

Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
           GRLN LP+A  GD ++A VKKG P+LRKKVMPAV+ R R P+ R+ GV++YFE  AGV V
Sbjct: 47  GRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIV 106

Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
              G MKGSA TGP+ KECADLWPR
Sbjct: 107 NPKGEMKGSAITGPIGKECADLWPR 131



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
           AG  FR+SLGLPV A +NCADNTG
Sbjct: 10  AGNKFRMSLGLPVAATVNCADNTG 33


>02_05_1201 +
           34929577-34929589,34930252-34930587,34931378-34931419,
           34931630-34931712
          Length = 157

 Score =  121 bits (291), Expect = 9e-28
 Identities = 55/85 (64%), Positives = 65/85 (76%)
 Frame = +3

Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
           GRLN LP+A  GD ++A VKKG P+LRKKVMPAV+ R R P+ R+ GV++YFE  AGV V
Sbjct: 64  GRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIV 123

Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
              G MKGSA TGP+ KECADLWPR
Sbjct: 124 NPKGEMKGSAITGPIGKECADLWPR 148



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
           AG  FR+SLGLPV A +NCADNTG
Sbjct: 27  AGNKFRMSLGLPVAATVNCADNTG 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,304,547
Number of Sequences: 37544
Number of extensions: 301245
Number of successful extensions: 739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)