Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H23
(882 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 129 1e-29
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 129 2e-29
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 129 2e-29
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 129 2e-29
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 129 2e-29
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 129 2e-29
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 129 2e-29
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 129 2e-29
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 50 1e-05
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 129 bits (312), Expect = 1e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 41 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 100
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 101 NNKGEMKGSAITGPVAKECADLWPR 125
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 4 SGAKFRISLGLPVGAVINCADNTG 27
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 129 bits (311), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKKVMPAVVXRXRXPFXRRXGVFIYFEXXAGVXV 395
GRLN LPAAG GD ++A VKKG PELRKKV PAVV R R + R+ GVF+YFE AGV V
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV 106
Query: 396 XNXGXMKGSAXTGPVAKECADLWPR 470
N G MKGSA TGPVAKECADLWPR
Sbjct: 107 NNKGEMKGSAITGPVAKECADLWPR 131
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 103 AGAXFRISLGLPVGAVINCADNTG 174
+GA FRISLGLPVGAVINCADNTG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTG 33
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +3
Query: 216 GRLNXLPAAGSGDXIVAXVKKGXPELRKK 302
GRLN LPAAG GD ++A VKKG PELRKK
Sbjct: 47 GRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,153,025
Number of Sequences: 237096
Number of extensions: 1416956
Number of successful extensions: 3462
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3331
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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