Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H20
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104...    79   5e-15

>08_01_0130 +
           1040696-1041049,1042135-1042275,1042422-1042673,
           1043797-1043904,1044289-1044593,1044720-1044841,
           1044979-1045225,1045308-1045365,1045414-1045530,
           1045718-1045753,1046492-1046554,1046958-1047047,
           1047241-1047399,1047475-1047596,1048145-1048217,
           1048307-1048375
          Length = 771

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 43/129 (33%), Positives = 67/129 (51%)
 Frame = +1

Query: 424 DFINNCNGEQVRFATDLYADLCHLLTNHLVEIKQPIRGLEILKKAIRKIQLFDSQLTSIH 603
           DF+ +C+ EQ+R A D +  +C +  N ++++  PIRG+  L+ AIRKIQ    +LT IH
Sbjct: 411 DFLVSCSAEQIRLAPDKFLSVCRVFKNEVMQLNAPIRGIAPLRAAIRKIQTSSEELTPIH 470

Query: 604 ADLCQLCLLSKCMXPAVEFLDTDVTGIGXELGGINDSNIFYYIITMGA*FIRX*KL**SF 783
           AD   LCLL+K     +  L+ D+  +          ++F Y    G  +I   K   + 
Sbjct: 471 ADYLLLCLLAKQYKAGLSVLEDDILEVD------QPKDLFLYCYYGGMIYIGLKKFTIAL 524

Query: 784 VFL*SCXXC 810
            FL +C  C
Sbjct: 525 DFLHNCLQC 533


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,729
Number of Sequences: 37544
Number of extensions: 243988
Number of successful extensions: 398
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)