Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H20
(905 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF129081-1|AAD28606.1| 445|Drosophila melanogaster COP9 signalo... 79 1e-14
AY071575-1|AAL49197.1| 445|Drosophila melanogaster RE63441p pro... 78 1e-14
AE014296-3441|AAF51652.1| 445|Drosophila melanogaster CG18332-P... 78 1e-14
>AF129081-1|AAD28606.1| 445|Drosophila melanogaster COP9
signalosome subunit 3 CSN3 protein.
Length = 445
Score = 78.6 bits (185), Expect = 1e-14
Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Frame = +1
Query: 406 MYQQFHDFINNCNGEQVRFATDLYADLCHLLTNHLVEIKQPIRGLEILKKAIRKIQLFDS 585
+ Q DF+ N EQ+R+A + CHL T +V+ I G+ I+ +AI +I+ ++
Sbjct: 79 LIQLMRDFVQRNNNEQLRYAVCAFYKTCHLFTEFVVQKNLSILGIRIISRAIDQIRQLET 138
Query: 586 QLTSIHADLCQLCLLSKCMXPAVEFLDTDVTGI--------------GXELGGINDSNIF 723
QLT IHADLC L L +K A+ +LD D+T I ND+ F
Sbjct: 139 QLTPIHADLCLLSLKAKNFSVALPYLDADITDISTVAAECKTQQQQQSQHADANNDAKYF 198
Query: 724 -YYIITMGA*FIRX*KL**SFVFL*SCXXCXGXVVXHIMLEAYKK 855
Y G + + F C + HIMLEAYKK
Sbjct: 199 LLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKK 243
Score = 56.0 bits (129), Expect = 7e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 189 FVNNVRXXSASGNFRAXSXLXAKSXXVLQXXXFHLNTVLETLDIQQHSLGVLAVLVAK 362
+VN VR SASG++R + +S +L L+ VLETLD+QQHSLGVL VL+AK
Sbjct: 8 YVNQVRTLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLLAK 65
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 719 FFTILLLWGHDLY-GXENYDRALYFFEV 799
+F + +G +Y +NY+RALYFFEV
Sbjct: 197 YFLLYFYYGGMIYTAVKNYERALYFFEV 224
>AY071575-1|AAL49197.1| 445|Drosophila melanogaster RE63441p
protein.
Length = 445
Score = 78.2 bits (184), Expect = 1e-14
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Frame = +1
Query: 406 MYQQFHDFINNCNGEQVRFATDLYADLCHLLTNHLVEIKQPIRGLEILKKAIRKIQLFDS 585
+ Q DF+ N EQ+R+A + + CHL T +V+ I G+ I+ +AI +I+ ++
Sbjct: 79 LIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIRIISRAIDQIRQLET 138
Query: 586 QLTSIHADLCQLCLLSKCMXPAVEFLDTDVTGI--------------GXELGGINDSNIF 723
QLT IHADLC L L +K + +LD D+T I ND+ F
Sbjct: 139 QLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQQQQSQHADANNDAKYF 198
Query: 724 -YYIITMGA*FIRX*KL**SFVFL*SCXXCXGXVVXHIMLEAYKK 855
Y G + + F C + HIMLEAYKK
Sbjct: 199 LLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKK 243
Score = 56.0 bits (129), Expect = 7e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 189 FVNNVRXXSASGNFRAXSXLXAKSXXVLQXXXFHLNTVLETLDIQQHSLGVLAVLVAK 362
+VN VR SASG++R + +S +L L+ VLETLD+QQHSLGVL VL+AK
Sbjct: 8 YVNQVRTLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLLAK 65
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 719 FFTILLLWGHDLY-GXENYDRALYFFEV 799
+F + +G +Y +NY+RALYFFEV
Sbjct: 197 YFLLYFYYGGMIYTAVKNYERALYFFEV 224
>AE014296-3441|AAF51652.1| 445|Drosophila melanogaster CG18332-PA
protein.
Length = 445
Score = 78.2 bits (184), Expect = 1e-14
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Frame = +1
Query: 406 MYQQFHDFINNCNGEQVRFATDLYADLCHLLTNHLVEIKQPIRGLEILKKAIRKIQLFDS 585
+ Q DF+ N EQ+R+A + + CHL T +V+ I G+ I+ +AI +I+ ++
Sbjct: 79 LIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIRIISRAIDQIRQLET 138
Query: 586 QLTSIHADLCQLCLLSKCMXPAVEFLDTDVTGI--------------GXELGGINDSNIF 723
QLT IHADLC L L +K + +LD D+T I ND+ F
Sbjct: 139 QLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQQQQSQHADANNDAKYF 198
Query: 724 -YYIITMGA*FIRX*KL**SFVFL*SCXXCXGXVVXHIMLEAYKK 855
Y G + + F C + HIMLEAYKK
Sbjct: 199 LLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKK 243
Score = 56.0 bits (129), Expect = 7e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 189 FVNNVRXXSASGNFRAXSXLXAKSXXVLQXXXFHLNTVLETLDIQQHSLGVLAVLVAK 362
+VN VR SASG++R + +S +L L+ VLETLD+QQHSLGVL VL+AK
Sbjct: 8 YVNQVRTLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLLAK 65
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 719 FFTILLLWGHDLY-GXENYDRALYFFEV 799
+F + +G +Y +NY+RALYFFEV
Sbjct: 197 YFLLYFYYGGMIYTAVKNYERALYFFEV 224
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,035,537
Number of Sequences: 53049
Number of extensions: 439052
Number of successful extensions: 710
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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