Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H19
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 177 4e-43
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 8e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 60 6e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 49 1e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.028
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 36 1.9
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 34 5.7
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 7.5
UniRef50_Q1RPQ0 Cluster: Polyprotein; n=1; Brassica juncea|Rep: ... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 177 bits (430), Expect = 4e-43
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +2
Query: 554 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 733
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 734 AVXISVRCXSFAPSWAVCTNP 796
AV ISVRC SFAPSWAVCTNP
Sbjct: 84 AVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 646 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSSV 756
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2
Query: 554 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 667
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +2
Query: 554 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 679
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/84 (48%), Positives = 46/84 (54%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLNEHHKN 570
RPR RFSIGSAPL K+
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKS 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 60.5 bits (140), Expect = 6e-08
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -2
Query: 796 GVXAHSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 629
GV A+SPAWSER P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 699 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 580
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/72 (41%), Positives = 32/72 (44%)
Frame = +2
Query: 581 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVXISVRCX 760
VR GETRQD K P P PPFSL + + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 761 SFAPSWAVCTNP 796
SFAPSWAV NP
Sbjct: 83 SFAPSWAVSKNP 94
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 694 FLPSGSVALSHSSRCXYLSSVXVVRSKLGCVHXPPFXPXXXPYPV 828
F +GSVALSHSS + PPF P PYPV
Sbjct: 61 FSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYPV 105
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 518 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 667
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 227 QVNNNNCIHFMFQVQGXVWXVFSALMNRPTRGERRFAYW 343
++ + NC+ + V +ALMNRPTRGERRFAYW
Sbjct: 3 ELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 796 GVXAHSPAWSERXTPN 749
GV AHSPAWSER TPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 726 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 622
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 796 GVXAHSPAWSERXTPN*DT 740
GV A+SPAWSER TP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.5 bits (73), Expect = 7.5
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -3
Query: 726 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 547
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 546 GGAYGKTPATRPFY-GSWPFAGLLL 475
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
>UniRef50_Q1RPQ0 Cluster: Polyprotein; n=1; Brassica juncea|Rep:
Polyprotein - Brassica juncea (Leaf mustard) (Indian
mustard)
Length = 246
Score = 33.1 bits (72), Expect = 9.9
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +3
Query: 549 PERASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGAFS* 728
P+ ++ S LK + D+T K+P +K+PR D A+ P K+G+ S
Sbjct: 74 PKGSTHMSLLKDAGIQGDKTAKMPLEDGYKIPREGEIEDSKAFHDPKNTG--SKKGSSST 131
Query: 729 LTLXVSQFGVXRSLQAGLC 785
F + R+ +A +C
Sbjct: 132 SPSHDQTFALLRTKRASIC 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,502,549
Number of Sequences: 1657284
Number of extensions: 14119156
Number of successful extensions: 40171
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 38058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40136
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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