Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H18
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.61 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   10.0 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   10.0 

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +2

Query: 227 SPKNIRVGYLEGDDIVDINKADSSLPTTLLQILRNGDLEKVKKLKSTKPATIPLS 391
           S K  R  Y   DD+++  K   +  TTL       +L KVK +  T P    LS
Sbjct: 235 SKKKTRYYYRSVDDVIEKGKRPGAFRTTL-----GSELSKVKVIDMTGPQQRVLS 284



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 470 EQNLTPPPVPMVFSKFSSTI 529
           E N  PPP P     F+ T+
Sbjct: 727 ENNAPPPPPPPRVESFAETV 746


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = +2

Query: 242 RVGYLEGDDIVDINKADSSLPTTLLQILRNGDLEKVKKLKSTKPATIPLSSVTLTAPIH 418
           +V  L   +++ ++ A +SLPT  L++  N    +   L     + +P+ + +LT   H
Sbjct: 459 QVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSLTELRH 517


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
 Frame = +2

Query: 395 VTLTAPIHGVDKILCIGLNYKDHCQEQNLTPP-----PVPMVF 508
           + L+ P+     I   G+ Y+D C      PP     P P++F
Sbjct: 166 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFVPPPLMF 208


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
 Frame = +2

Query: 395 VTLTAPIHGVDKILCIGLNYKDHCQEQNLTPP-----PVPMVF 508
           + L+ P+     I   G+ Y+D C      PP     P P++F
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFVPPPLMF 441


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
 Frame = +2

Query: 395 VTLTAPIHGVDKILCIGLNYKDHCQEQNLTPP-----PVPMVF 508
           + L+ P+     I   G+ Y+D C      PP     P P++F
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFVPPPLMF 441


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 750 CPWTSRAGTAPMFFSFCQSLA 688
           C WTSR     ++ ++  SLA
Sbjct: 149 CSWTSRRSKVMVYLAWVASLA 169


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 783 SSARTGPADRTCPWTSRA 730
           SSA T PA R  P+ S A
Sbjct: 50  SSASTSPAARMYPYVSAA 67


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 783 SSARTGPADRTCPWTSRA 730
           SSA T PA R  P+ S A
Sbjct: 50  SSASTSPAARMYPYVSAA 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,546
Number of Sequences: 336
Number of extensions: 3807
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)