Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H18
         (903 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family pr...    63   3e-10
At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family pr...    60   3e-09
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t...    30   1.8  
At1g76790.1 68414.m08936 O-methyltransferase family 2 protein si...    30   2.4  
At2g35050.1 68415.m04300 protein kinase family protein contains ...    29   3.2  

>At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family
           protein contains Pfam domain, PF01557:
           fumarylacetoacetate hydrolase family protein
          Length = 222

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 33/101 (32%), Positives = 55/101 (54%)
 Frame = +2

Query: 428 KILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPVRIRTDVTKKVDWEVELCVV 607
           KI+C+G NY  H +E     P  P++F K +S+ +     + I   +   +  EVEL +V
Sbjct: 15  KIVCVGRNYAAHAKELGNAVPKEPVIFLKPTSSYLENGGTIEIPHPLDS-LHHEVELALV 73

Query: 608 VGREASCVREEDALQHVAGYTVAQDISARDWQKEKNMGAVP 730
           +G++A  V E  A+ ++ GY VA D++AR+ Q       +P
Sbjct: 74  IGQKARDVPESIAMDYIGGYAVALDMTARELQASAKASGLP 114


>At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family
           protein contains Pfam domain, PF01557:
           fumarylacetoacetate hydrolase family protein
          Length = 224

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 35/107 (32%), Positives = 56/107 (52%)
 Frame = +2

Query: 428 KILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPVRIRTDVTKKVDWEVELCVV 607
           KI+ +GLNY  H +E     P  P+VF K +S+ +     + I   +   +  EVEL VV
Sbjct: 15  KIVGVGLNYASHAKELGNALPKDPIVFLKPTSSYLENGGTIEIPHPLDS-LHHEVELAVV 73

Query: 608 VGREASCVREEDALQHVAGYTVAQDISARDWQKEKNMGAVPAREVHG 748
           +G++A  V E  A+ ++ GY +A D++AR+ Q       +P     G
Sbjct: 74  IGQKARDVPERLAMNYIGGYALALDMTARELQVSAMASGLPCTLAKG 120


>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
           fumarylacetoacetase (Fumarylacetoacetate hydrolase,
           Beta-diketonase, FAA)[Rattus norvegicus]
           SWISS-PROT:P25093
          Length = 421

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 569 TKKVDWEVELCVVVG---REASCVREEDALQHVAGYTVAQDISARDWQ 703
           +KK+D+E+E+  VVG        +   +A  H+ G  +  D SARD Q
Sbjct: 198 SKKLDFELEMAAVVGPGNELGKPIDVNNAADHIFGLLLMNDWSARDIQ 245


>At1g76790.1 68414.m08936 O-methyltransferase family 2 protein
           similar to caffeic acid O-methyltransferase
           [Catharanthus roseus][GI:18025321], catechol
           O-methyltransferase GB:CAA55358 [Vanilla planifolia]
          Length = 367

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +2

Query: 173 FLVTKTRNMKLVQF----SYKDSPKNIRVGYLEGDDIVDINKADSSLPTTLLQILRNGDL 340
           F+ +K  N+K + F    +   +P    V ++ GD  VD+ K D+ L   +L    + D 
Sbjct: 218 FVTSKYPNIKGINFDLTCALTQAPSYPNVEHVAGDMFVDVPKGDAILLKRILHDWTDEDC 277

Query: 341 EKVKK 355
           EK+ K
Sbjct: 278 EKILK 282


>At2g35050.1 68415.m04300 protein kinase family protein contains Pfam
            profile: PF00069 Eukaryotic protein kinase domain
          Length = 1257

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +2

Query: 260  GDDIVDINKADSSLPTTLLQILRNGDLEKVKKLKSTKPATI 382
            G  ++D   ADS + +  LQ+++N DLE++K+L S    T+
Sbjct: 950  GVPLIDFMAADSGMRS--LQVIKNDDLEELKELGSGTFGTV 988


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,165,320
Number of Sequences: 28952
Number of extensions: 323391
Number of successful extensions: 890
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)