Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H17
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.76 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   7.1  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   9.4  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 693 ATSSVMPNSFKASEYVSAAAGKQQYA 616
           +T++ + NSFK+ ++ SAAA    YA
Sbjct: 592 STAAAVANSFKSEQFSSAAAAVANYA 617


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 197  RPFCNTLICTKNSLNSSGTVRINFRVFS 114
            R  C  L+     LNS GTV  N  +F+
Sbjct: 1486 RVACKRLVSMNMPLNSDGTVLFNATLFA 1513


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 149 TNLVNFWYKSKCYKKVLRLLPDTV 220
           T L+N W   K + K+  +LP  +
Sbjct: 201 TRLINRWVSDKTHGKIPNILPSAL 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,445
Number of Sequences: 2352
Number of extensions: 15807
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)