Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H17
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-9|CAD89747.1|  497|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z69383-14|CAA93405.3|  497|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z75713-4|CAB00050.1|  603|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>Z69384-9|CAD89747.1|  497|Caenorhabditis elegans Hypothetical
           protein F13E9.1 protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
 Frame = +2

Query: 143 CLTNLVNFWYKSKCYKKVLRLLPDTVVMDVYYKMLQE--KKLCILHTELSELDVFER-LL 313
           CL  +   + + KC+ + ++LLP+  V++V Y  + E    L  L + L+ELD+    L 
Sbjct: 290 CLEEVDLSFNEIKCFDESMKLLPEVRVLNVSYNSITEIGSNLAFL-SSLTELDLSNNTLT 348

Query: 314 RFAGCQLKL-----LECFQAVIEHCSKLSTELATAYVEKCNANVRSRNSLIQLG 460
           +  G   KL     L   +  IE  S L    +  Y++    N+++ +++  +G
Sbjct: 349 KIDGWNEKLGNIKKLILSENAIEDLSGLGKLYSLEYLDAKGNNIQNLDAVQGIG 402


>Z69383-14|CAA93405.3|  497|Caenorhabditis elegans Hypothetical
           protein F13E9.1 protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
 Frame = +2

Query: 143 CLTNLVNFWYKSKCYKKVLRLLPDTVVMDVYYKMLQE--KKLCILHTELSELDVFER-LL 313
           CL  +   + + KC+ + ++LLP+  V++V Y  + E    L  L + L+ELD+    L 
Sbjct: 290 CLEEVDLSFNEIKCFDESMKLLPEVRVLNVSYNSITEIGSNLAFL-SSLTELDLSNNTLT 348

Query: 314 RFAGCQLKL-----LECFQAVIEHCSKLSTELATAYVEKCNANVRSRNSLIQLG 460
           +  G   KL     L   +  IE  S L    +  Y++    N+++ +++  +G
Sbjct: 349 KIDGWNEKLGNIKKLILSENAIEDLSGLGKLYSLEYLDAKGNNIQNLDAVQGIG 402


>Z75713-4|CAB00050.1|  603|Caenorhabditis elegans Hypothetical
           protein T01G9.3 protein.
          Length = 603

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 191 KVLRLLPDTVVMDVYYKMLQEKKLC-ILHTELSELDVFERLL 313
           K LR LP   V+D+ +  +QE   C   +T +S+LD+   LL
Sbjct: 250 KELRSLPQLSVLDLSHNSIQEITACAFCNTNISKLDLSHNLL 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,982,802
Number of Sequences: 27780
Number of extensions: 372163
Number of successful extensions: 1181
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)