Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H16
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0194 - 41896831-41896895,41897377-41897440,41898074-418981...    45   7e-05
05_04_0140 - 18358997-18359082,18359255-18359318,18359469-183595...    36   0.045
09_02_0417 - 8915604-8916779,8916863-8917270                           32   0.74 
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722...    29   6.9  
01_01_0915 - 7215863-7216063,7216743-7216802,7220032-7220091,722...    28   9.1  

>01_07_0194 -
           41896831-41896895,41897377-41897440,41898074-41898195,
           41898304-41898433,41899659-41899751
          Length = 157

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = +1

Query: 322 AWCLVRSKYPTDIRKGILLLKELF--NSHPEGKRDYLFYLAIGNARIKEYXKALHYVKSF 495
           +W LV S+   D+ +GI +L+     +  P   R+ L+ LA+G+ R  +Y ++   ++  
Sbjct: 54  SWALVHSRNTDDVNRGIAMLQASLGGSKSPLEAREKLYLLAVGHYRNGDYPRSRQLLEHC 113

Query: 496 LEIEPXNQQVLALERXI 546
           LEI+P   Q L+L++ +
Sbjct: 114 LEIQPGWGQALSLKKTV 130


>05_04_0140 -
           18358997-18359082,18359255-18359318,18359469-18359583,
           18360101-18360216,18360420-18360541,18360628-18360757,
           18361328-18361420
          Length = 241

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +1

Query: 322 AWCLVRSKYPTDIRKGILLLKELF--NSHPEGKRDYLFYLAIGNARIKEYXKALHYVKSF 495
           +W LV SK   D+ +GI +L+     ++ P   R+ L+ LA+G+ R  +Y ++   V   
Sbjct: 54  SWALVHSKNQEDVNRGIGMLEASLGQSNSPLQTREKLYLLAVGHYRNGDYPRSRQLVDRC 113

Query: 496 LE 501
           LE
Sbjct: 114 LE 115


>09_02_0417 - 8915604-8916779,8916863-8917270
          Length = 527

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 211 EXVLXEIVSSEDLQKFERVFHEQLHQGNVSHK-AQFEYAWCLVRSKYPTDIRKGILLLKE 387
           E V+ E  S+    +   + H + H   +  K A F   WC V++KYP+   +G+ L+ +
Sbjct: 151 EKVVAEYNSTIPATRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDK 210

Query: 388 LFNSHPEGKR 417
            +  + E  R
Sbjct: 211 TWLMYNEEAR 220


>05_03_0678 -
           16871481-16871620,16871836-16871881,16872170-16872243,
           16872495-16872552,16872640-16872702,16872891-16873012,
           16873132-16873247,16873367-16873428,16873497-16873589,
           16874061-16874138,16874248-16874423,16874500-16874550,
           16874964-16875078
          Length = 397

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 413 FPSG*ELNNSLRSKIPFRISVGYLLR---TKHHAYS 315
           F S  E+ NS++ K PF+I +G +      K HAY+
Sbjct: 87  FDSVAEMENSIKEKCPFKIDIGPVYSVDPAKRHAYA 122


>01_01_0915 -
           7215863-7216063,7216743-7216802,7220032-7220091,
           7221138-7221203,7221927-7221992,7222334-7222411,
           7222940-7223297,7224548-7224606
          Length = 315

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 358 YP-LDTCCALNTMRIQTG-LCGKRSLGAIVHERP 263
           YP L  CC+ N M+ QTG + G+RS   +  E P
Sbjct: 213 YPYLGQCCSANPMQQQTGIMAGERSTDGLFPEFP 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,876,469
Number of Sequences: 37544
Number of extensions: 240218
Number of successful extensions: 403
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)